Dipeptide Composition

 

This module allow user to compute Dipeptide composition of protein/peptide sequences. Users may either type or upload a file of sequences in single line or FASTA format. The user can also provide the PDB or UniProt IDs in the mentioned format. For more information see HELP page.

Paste peptide sequence(s) in single line format or FASTA format:
OR Submit sequence file: 
OR PDB IDs:      
OR UniProt IDs: 
  • Select portion of Sequence:
    • This section allow users to select either complete or specific portion of the seqeunce, such as

      1. Whole: Performs operation on complete sequence
      2. N-Term: This allows to cut the user specified portion from N-terminal of the sequence
      3. C-Term: This allows to cut the user specified portion from C-terminal of the sequence
      4. Split: This allows users to split the sequence into fragments and performs calculation indepedently
      5. Rest: This allows users to drop the residues from N- and C-terminal and performs calculation on the remaining fragment
Whole  N-Term      C-Term      Split      Rest  N-term   C-term  
Order of Dipeptide     This allows users to generate the dipeptides with desired order, such as order 1 means dipeptides made of consecutive residues in the provided seqeunce i.e. no gap.