Acknowledgement
In this web server we used number of software for computing different type of features. In addition, formula used for computing features were adopted from previous studies. We wish to thank/accknowledge auhors of these softwatre and studies for providing thsee tools for public use
Name of Software | Desciption | |
---|---|---|
PSIBLAST | We used this software to generate PSSM profile of a protein from its sequence | |
DSSP | This is a standard software commonly used for assigning secondary structure of residues in a protein from its structure. We used this software for genearting secondary structure features of a protein. | |
Naccess | Naccess is a stand alone program that calculates the accessible area of a molecule from a PDB. We genertae surface accessibility features using this software | |
PaDEL | We used this software to calculate molecular descriptors and fingerprints for generating descriptor based features |