Pfeature: A web server for computing protein and peptide features

Acknowledgement

In this web server we used number of software for computing different type of features. In addition, formula used for computing features were adopted from previous studies. We wish to thank/accknowledge auhors of these softwatre and studies for providing thsee tools for public use

Name of SoftwareDesciption
PSIBLASTWe used this software to generate PSSM profile of a protein from its sequence
DSSPThis is a standard software commonly used for assigning secondary structure of residues in a protein from its structure. We used this software for genearting secondary structure features of a protein.
NaccessNaccess is a stand alone program that calculates the accessible area of a molecule from a PDB. We genertae surface accessibility features using this software
PaDELWe used this software to calculate molecular descriptors and fingerprints for generating descriptor based features