Atom & Bond Composition

This module allow users to compute atom and bond composition protein sequences. User may enter either one sequence in one line or sequences in single line or FASTA format. The user can also provide the PDB or UniProt IDs in the mentioned format. For more information see HELP page.

Paste peptide sequence(s) in single line format or FASTA format:

OR Submit sequence file:

OR PDB IDs:

OR UniProt IDs:

Select method:

This section allow users to select the level, such as

Atom: This allows user to calcualte the percentage composition of submitted sequences at atomic level
Bond: This allows user to calcualte the percentage composition of submitted sequences at bond level
Atom & Bond: This allows user to calcualte the percentage composition of submitted sequences at atomic and bond level

Atom Bond Atom & Bond

Select portion of Sequence:

This section allow users to select either complete or specific portion of the seqeunce, such as

Whole: Performs operation on complete sequence
N-Term: This allows to cut the user specified portion from N-terminal of the sequence
C-Term: This allows to cut the user specified portion from C-terminal of the sequence
Split: This allows users to split the sequence into fragments and performs calculation indepedently
Rest: This allows users to drop the residues from N- and C-terminal and performs calculation on the remaining fragment

Whole N-Term C-Term Split Rest N-Term C-Term