SAPdb_ID | Peptide Name | Peptide Sequence | N-Terminal Modification | C-Terminal Modification | Technique | Type of Self-assembly | PMID |
---|---|---|---|---|---|---|---|
1013 | NH2-L-Phe-L-Phe-COOH | FF | Free | Free | Transmission Electron Microscopy (TEM) | Nanotube | 12714741 |
1014 | NH2-D-Phe-D-Phe-COOH | ff | Free | Free | Transmission Electron Microscopy (TEM) | Nanotube | 12714741 |
1015 | DiPhenylalanine peptide | FF | Free | Free | Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM), CD (Circular Dichroism spectroscopy) | Nanotube | 16430299 |
1019 | DiPhenylalanine peptide | FF | Free | Free | AFM (Atomic Force Microscopy) | Nanotube | 16719470 |
1020 | Cationic dipeptide nanotubes (CDPNTs) (H-Phe-Phe-NH2·HCl) | FF | Free | HCl | AFM (Atomic Force Microscopy), Transmission Electron Microscopy (TEM) | Nanotube | 17328086 |
1022 | Zwitterionic dipeptide diPhenylalanine (l-Phe-l-Phe) | FF | Free | Free | CD (Circular Dichroism spectroscopy) | Nanotube | 17328086 |
1023 | DiPhenylalanine (H-Phe-Phe-OH) | FF | Free | Free | Scanning Electron Microscopy (SEM) | Nanotube | 18035858 |
1025 | Fmoc-Phe-Phe-OH | FF | Fmoc [or N-(fluorenyl-9-methoxycarbonyl)] | Free | Scanning Electron Microscopy (SEM) | Nanotube | 18035858 |
1026 | Boc-Phe-Phe-OH | FF | Boc (or t-butoxycarbonyl) | Free | Scanning Electron Microscopy (SEM) | Nanotube | 18035858 |
1070 | FFK | FFK | Acetylation | Amidation | AFM (Atomic Force Microscopy), Transmission Electron Microscopy (TEM), DLS (Dynamic Light Scattering) and CD (Circular Dichroism spectroscopy) | Long (amyloid like) tubular structure | 23871602 |
1079 | KFG | KFG | Free | Free | Transmission Electron Microscopy (TEM), DLS (Dynamic Light Scattering) and AFM (Atomic Force Microscopy) | Nanotube structure | 24338837 |
1109 | Boc-Trp-Ile-Ile-OMe | WII | Boc (or t-butoxycarbonyl) | Methoxy | Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM), DLS (Dynamic Light Scattering), CD (Circular Dichroism spectroscopy), and FTIR (Fourier Transform Infrared) Spectroscopy (Fourier Transform Infrared) Spectroscopy | Branched tubular structure and globular Structure | 22431418 |
1119 | Ac-VYK | VYK | Acetylation | Free | Transmission Electron Microscopy (TEM) | Tubular structure | 16339876 |
1178 | Fmoc-RGD | RGD | Fmoc [or N-(fluorenyl-9-methoxycarbonyl)] | Free | Transmission Electron Microscopy (TEM), AFM (Atomic Force Microscopy) | Nanotube | 19705843 |
1190 | Pro-Lys dipeptide 1 | PK | Free | 1,4,5,8-naphthalenetetracarboxylic acid diimide (NDI) | Transmission Electron Microscopy (TEM) | Nanotube, Nanofibers and helical twisted Nanoribbon mixture | 26360936 |
1191 | Pro-Lys dipeptide 1 | PK | Free | 1,4,5,8-naphthalenetetracarboxylic acid diimide (NDI) | Transmission Electron Microscopy (TEM) | Nanotube | 26360936 |
1192 | D1 or (L-alanine-3-amino-2-(2-fluoroPhenyl)-3-Phenylpropanoic acid (in SS conformation)) | L-alanine-3-amino-2-(2-fluorophenyl)-3-phenylpropanoic acid (in SS conformation) | Free | Free | Transmission Electron Microscopy (TEM) | Nanotube | 26335611 |
1193 | D2 or (L-alanine-3-amino-2-(2-fluoroPhenyl)-3-Phenylpropanoic acid(in RR conformation)) | L-alanine-3-amino-2-(2-fluorophenyl)-3-phenylpropanoic acid (in RR conformation) | Free | Free | Transmission Electron Microscopy (TEM) | Nanotube | 26335611 |
1197 | Ferrocene-FF | FF | Ferrocene (FC) | Free | Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) | Rectangular Nanotube | 26018930 |
1211 | Ferrocene-FF | FF | Ferrocene (FC) | Free | Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) | Nanotube | 26018930 |
1219 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotubes | 25574757 |
1220 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotubes | 25574757 |
1225 | Peptide 2 | Boc-Aib-m-ABA-OMe | Boc (or t-butoxycarbonyl) | Methoxy | FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM), Transmission Electron Microscopy (TEM) | Nanotubes | 25574757 |
1227 | Compound A | KK | Acetylation | Amidation | Transmission Electron Microscopy (TEM) | Nanotubes | 25384556 |
1228 | Compound B | KK | Free | Amidation | Transmission Electron Microscopy (TEM) | Nanotubes | 25384556 |
1253 | DiPhenylalanine | FF | Cyano-Napthalene or napthalene derivative | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | Flat bilayer with holes shape ( in 9/10 MD runs); Nanotube (in 1/10 MD runs) | 22468743 |
1254 | DiPhenylalanine | FF | Free | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | Spherical vesicle ( in 7/10 MD runs); Nanotube (in 2/10 MD runs); Bialyer shape (in 1/10 MD runs) | 22468743 |
1255 | DiPhenylalanine | FF | Free | Free | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | vesicle (in 3/10 MD runs); Nanotube ( in 3/10 MD runs); Flat bialyer with holes shape (in 4/10 MD runs) | 22468743 |
1259 | DiPhenylalanine | FF | Free | Free | AFM (Atomic Force Microscopy | Nanotube | 19496552 |
1260 | 2 Nal dipeptide or dinapthylalanine | nal-nal | Free | Free | AFM (Atomic Force Microscopy | Nanotube | 19496552 |
1274 | DiPhenylalanine | FF | Free | Free | Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy) | Tubular Nanostructure | 20000323 |
1275 | DiPhenylalanine | FF | Free | Free | Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy) | Tubular Nanostructure | 20000323 |
1276 | DiPhenylalanine | FF | Free | Free | Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy) | Tubular Nanostructure | 20000323 |
1417 | Boc-diPhenylalanine | FF | Boc (or t-butoxycarbonyl) | Free | HR - SEM (High Resolution Scanning Electron Microscopy) and DLS (Dynamic light scattering) | Nanotube | 25391268 |
1451 | NH2-Phe-Phe-OH | FF | Free | Free | Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) and AFM (Atomic Force Microscopy) | Nanotube | 24301009 |
1493 | Phe-alpha,beta-dehydroPhenylalanine | F-Delta-F | Free | Free | Transmission Electron Microscopy (TEM) and DLS (Dynamic Light scattering) | Nanotube | 22833945 |
1494 | cyclo-Phe-Phe | FF | Free | Free | Scanning Electron Microscopy (SEM) | Vertical Nanotube | 19893524 |
1495 | cyclo-D-Phe-D-Phe | ff | Free | Free | Scanning Electron Microscopy (SEM) | Vertical Nanotube | 19893524 |
1499 | Phe-Phe | FF | Free | Free | FE - SEM (Field Emission Scanning Electron Microscopy) | Nanotube | 19198495 |
1536 | FF | FF | Free | Free | Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy) | Nanotube | 20958029 |
1538 | DiPhenylalanine | FF | Free | Free | Scanning Electron Microscopy (SEM) | Nanotube | 21132174 |
1547 | Phe-Phe | FF | Free | Free | Transmission Electron Microscopy (TEM) and DLS (Dynamic Light scattering) | Nanotube | 21221462 |
1559 | Phe-Phe | FF | Free | Free | Scanning Electron Microscopy (SEM) | Tubular structure | 21879773 |
1561 | Phe-Phe | FF | Free | Free | Scanning Electron Microscopy (SEM) | Tubular and ribbon like morphology | 21879773 |
1614 | DiPhenylalanine mono-mannose conjugate | FF | Free | Free | Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy) | Tubular structure | 22535547 |
1617 | DiPhenylalanine | FF | Free | Free | EFM (Electrostatic Force Microscopy) | Hollow fibers | 18837544 |
1625 | FF | FF | Free | Free | Insilico method: MARTINI coarse - grained molecular dynamic | Tubes and Vesicles | 23795243 |
1626 | FW | FW | Free | Free | Insilico method: MARTINI coarse - grained molecular dynamic | Tubes and aggregate | 23795243 |
1634 | DiPhenylalanine | FF | Free | Free | ESEM (Environmental Scanning Electron Microscope) | Nanotubes | 24895323 |
1636 | Dileucine | LL | Free | Free | ESEM (Environmental Scanning Electron Microscope) | Nanotubes | 24895323 |