Details of SAPdb ID 1254 |
Primary information | ||
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SAPdb_ID | 1254 | |
PMID | 22468743 | |
Year | 2012 | |
Name | DiPhenylalanine | |
Sequence | FF | |
N-Terminal Modification | Free | |
C-Terminal Modification | Free | |
Non-terminal Modication | None | |
Length | 2 | |
Peptide/Conjugate/Mixture | Peptide | |
Conjugate Partner | None | |
Technique | Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software | |
Solvent | Water | |
Method | 40 MD simulations performed on a system consisting of 600 FF peptides at peptide concentrations: 85mg/mL | |
Concentration | 85 mg/ml | |
pH | NA | |
Temperature | 37 °C | |
Incubation Period | 60 - 1200 nanoseconds | |
Self-Assembly Formation | Yes | |
Type of Self-Assembly | Spherical vesicle ( in 7/10 MD runs); Nanotube (in 2/10 MD runs); Bialyer shape (in 1/10 MD runs) | |
Size of Self-Assembled structure | Diameter of vesicle : 9.2 nm; Diameter of nanotube : ‚à º5.1 to ‚à º5.6 nm | |
Linear/Cyclic | Linear | |
Stability of Nanostructure | Stable | |
Comment | NA | |
Secondary information | ||
Physico-Chemical properties |
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STRUCTURE |
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SMILES | N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C=O |