| HTR1B | 5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled | 1 |
| ADRA1A | adrenoceptor alpha 1A | 31 |
| ADRA2A | adrenoceptor alpha 2A | 10 |
| ADAM8 | adenosine deaminase | 1 |
| ADM | adrenomedullin | 1 |
| JUB | ajuba LIM protein | 1 |
| AKT1 | v-akt murine thymoma viral oncogene homolog 1 | 9 |
| AMBP | alpha-1-microglobulin/bikunin precursor | 20 |
| FAM123B | APC membrane recruitment protein 1 | 9 |
| FAM123A | APC membrane recruitment protein 2 | 10 |
| ANKRD6 | ankyrin repeat domain 6 | 1 |
| AP2A1 | adaptor-related protein complex 2, alpha 1 subunit | 9 |
| AP2A2 | adaptor-related protein complex 2, alpha 2 subunit | 1 |
| TEX2 | transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) | 1 |
| APC | adenomatosis polyposis coli 2 | 244 |
| APCDD1L | adenomatous polyposis coli | 1 |
| APOA1 | apolipoprotein A-I | 13 |
| ARHGEF7 | Rho guanine nucleotide exchange factor (GEF) 7 | 20 |
| ADAMTSL2 | ADAMTS-like 2 | 1 |
| ATXN1 | ataxin 1 | 1 |
| TNFAIP1 | tumor necrosis factor, alpha-induced protein 1 (endothelial) | 1 |
| BAMBI | BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) | 9 |
| BARX1 | BARX homeobox 1 | 10 |
| BCL2L2 | B-cell CLL/lymphoma 2 | 1 |
| BCL6 | B-cell CLL/lymphoma 6 | 1 |
| BMP4 | bone morphogenetic protein 4 | 14 |
| BMP7 | bone morphogenetic protein 7 | 29 |
| IMP | BRCA1 associated protein | 0 |
| CDH23 | cadherin 2, type 1, N-cadherin (neuronal) | 1 |
| CASP8 | caspase 8, apoptosis-related cysteine peptidase | 13 |
| C19orf29 | cactin, spliceosome C complex subunit | 1 |
| CAV2 | caveolin 2 | 1 |
| CBLB | Cbl proto-oncogene, E3 ubiquitin protein ligase B | 1 |
| CBLC | Cbl proto-oncogene, E3 ubiquitin protein ligase C | 40 |
| CCL5 | chemokine (C-C motif) ligand 5 | 20 |
| CCND1 | cyclin D1 | 14 |
| CD44 | CD44 molecule (Indian blood group) | 5 |
| CHST10 | carbohydrate (chondroitin 4) sulfotransferase 11 | 20 |
| CIDEA | cell death-inducing DFFA-like effector a | 50 |
| CITED1 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 | 1 |
| CMYA5 | cardiomyopathy associated 5 | 1 |
| CYP26B1 | cytochrome P450, family 26, subfamily B, polypeptide 1 | 30 |
| CYP26C1 | cytochrome P450, family 26, subfamily C, polypeptide 1 | 11 |
| CYP7B1 | cytochrome P450, family 7, subfamily B, polypeptide 1 | 1 |
| CRHR2 | corticotropin releasing hormone receptor 2 | 41 |
| CRIPAK | cysteine-rich PAK1 inhibitor | 9 |
| DAB1 | Dab, reelin signal transducer, homolog 1 (Drosophila) | 37 |
| DACT3 | dishevelled-binding antagonist of beta-catenin 3 | 1 |
| DDX3X | DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked | 1 |
| DGKZ | diacylglycerol kinase, zeta | 20 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 | 6 |
| DKK2 | dickkopf WNT signaling pathway inhibitor 2 | 46 |
| Dkk3 | dickkopf WNT signaling pathway inhibitor 3 | 4 |
| DKK3 | dickkopf WNT signaling pathway inhibitor 3 | 6 |
| DLK1 | delta-like 1 homolog (Drosophila) | 103 |
| C1orf187 | dorsal inhibitory axon guidance protein | 1 |
| DRD1 | dopamine receptor D1 | 20 |
| DRD2 | dopamine receptor D2 | 31 |
| DRD5 | dopamine receptor D5 | 20 |
| DUSP18 | dual specificity phosphatase 18 | 1 |
| DUSP22 | dual specificity phosphatase 22 | 2 |
| DUSP4 | dual specificity phosphatase 4 | 10 |
| DUSP5 | dual specificity phosphatase 5 | 1 |
| DUSP6 | dual specificity phosphatase 6 | 4 |
| DUSP9 | dual specificity phosphatase 9 | 1 |
| EGR1 | early growth response 1 | 9 |
| EPHA2 | EPH receptor A2 | 1 |
| ESR1 | estrogen receptor 1 | 109 |
| FBP1 | fructose-1,6-bisphosphatase 1 | 1 |
| FBN2 | fibrillin 2 | 64 |
| FGFR3 | fibroblast growth factor receptor 3 | 1 |
| FZD10 | frizzled family receptor 1 | 31 |
| GAS1 | growth arrest-specific 1 | 13 |
| GAS6 | growth arrest-specific 6 | 10 |
| GATA2 | GATA binding protein 2 | 31 |
| GATA3 | GATA binding protein 3 | 11 |
| GNB2L1 | guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 | 1 |
| GDNF | glial cell derived neurotrophic factor | 50 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 20 |
| GLRA1 | glycine receptor, alpha 1 | 20 |
| GNAI2 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 | 9 |
| GPC1 | glypican 1 | 1 |
| GREM1 | gremlin 1, DAN family BMP antagonist | 30 |
| GRIK1 | glutamate receptor, ionotropic, kainate 1 | 30 |
| GRIK3 | glutamate receptor, ionotropic, kainate 3 | 51 |
| GSC2 | goosecoid homeobox | 10 |
| GSTP1 | glutathione S-transferase pi 1 | 63 |
| GSTp | glutathione S-transferase pi 1 | 30 |
| HDAC1 | histone deacetylase 1 | 13 |
| HEY1 | hairy/enhancer-of-split related with YRPW motif 1 | 9 |
| HEYL | hairy/enhancer-of-split related with YRPW motif-like | 20 |
| HHEX | hematopoietically expressed homeobox | 1 |
| HHIPL1 | hedgehog interacting protein | 1 |
| HIC1 | hypermethylated in cancer 1 | 26 |
| HIF1AN | hypoxia inducible factor 1, alpha subunit inhibitor | 9 |
| ONECUT1 | one cut homeobox 1 | 10 |
| HYAL2 | hyaluronoglucosaminidase 2 | 1 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 110 |
| IGFBP5 | insulin-like growth factor binding protein 5 | 33 |
| IGF1R | insulin-like growth factor 1 receptor | 10 |
| NFKBID | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta | 9 |
| IL1B | interleukin 1, beta | 20 |
| IL1RN | interleukin 1 receptor antagonist | 33 |
| IL8 | interleukin 8 | 13 |
| IRF4 | interferon regulatory factor 4 | 30 |
| IRS1 | insulin receptor substrate 1 | 1 |
| ISL1 | ISL LIM homeobox 1 | 1 |
| CAMK2B | calcium/calmodulin-dependent protein kinase II beta | 21 |
| KDM1 | lysine (K)-specific demethylase 1A | 1 |
| KIF26A | kinesin family member 26A | 10 |
| KIF7 | kinesin family member 7 | 1 |
| PRKCA | protein kinase C, alpha | 10 |
| PRKCB | protein kinase C, beta | 10 |
| PRKCB1 | protein kinase C, beta | 21 |
| PRKCZ | protein kinase C, zeta | 1 |
| LECT1 | leukocyte cell derived chemotaxin 1 | 20 |
| LEMD2 | LEM domain containing 2 | 9 |
| LIF | leukemia inhibitory factor | 13 |
| ZFYVE28 | zinc finger, FYVE domain containing 28 | 1 |
| MAG | melanoma antigen family A, 1 (directs expression of antigen MZ2-E) | 1 |
| MAD2L2 | MAD2 mitotic arrest deficient-like 2 (yeast) | 1 |
| MDFIC | MyoD family inhibitor | 1 |
| MDM2 | MDM2 oncogene, E3 ubiquitin protein ligase | 9 |
| MEN1 | multiple endocrine neoplasia I | 24 |
| MGRN1 | mahogunin ring finger 1, E3 ubiquitin protein ligase | 1 |
| MMRN2 | multimerin 2 | 9 |
| NBL1 | neuroblastoma 1, DAN family BMP antagonist | 13 |
| SLC24A2 | solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 | 9 |
| NEUROD1 | neuronal differentiation 1 | 49 |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | 1 |
| NKD2 | naked cuticle homolog 2 (Drosophila) | 10 |
| NKX2-1 | NK2 homeobox 1 | 10 |
| TITF1 | NK2 homeobox 1 | 20 |
| NKX2-5 | NK2 homeobox 5 | 30 |
| CARD15 | nucleotide-binding oligomerization domain containing 2 | 13 |
| NODAL | nodal growth differentiation factor | 10 |
| NOTCH1 | notch 1 | 1 |
| NPY2R | neuropeptide Y receptor Y5 | 10 |
| NR0B1 | nuclear receptor subfamily 0, group B, member 1 | 1 |
| NR1D1 | nuclear receptor subfamily 1, group D, member 1 | 1 |
| ONECUT2 | one cut homeobox 2 | 10 |
| OPRM1 | opioid receptor, mu 1 | 40 |
| TP53 | tumor protein p53 | 1 |
| TP73 | tumor protein p73 | 100 |
| p73 | tumor protein p73 | 88 |
| P73 | tumor protein p73 | 56 |
| PALM2 | paralemmin | 1 |
| PDPK1 | 3-phosphoinositide dependent protein kinase-1 | 20 |
| PEG10 | paternally expressed 10 | 21 |
| COX2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) | 11 |
| PPARGC1B | peroxisome proliferator-activated receptor gamma | 1 |
| PPM1A | protein phosphatase, Mg2+/Mn2+ dependent, 1A | 1 |
| PRAMEF2 | PRAME family member 2 | 20 |
| PRDM16 | PR domain containing 16 | 19 |
| PTCH1 | patched 1 | 1 |
| PTCH2 | patched 2 | 13 |
| PTEN | phosphatase and tensin homolog | 9 |
| PTPN6 | protein tyrosine phosphatase, non-receptor type 6 | 13 |
| PTPRJ | protein tyrosine phosphatase, receptor type, J | 20 |
| PTPRO | protein tyrosine phosphatase, receptor type, O | 40 |
| PXDN | peroxidasin homolog (Drosophila) | 50 |
| RASA3 | RAS p21 protein activator 3 | 10 |
| RGS12 | regulator of G-protein signaling 12 | 9 |
| RGS17 | regulator of G-protein signaling 17 | 54 |
| RGS20 | regulator of G-protein signaling 20 | 26 |
| RGSL1 | regulator of G-protein signaling like 1 | 20 |
| DLC1 | deleted in liver cancer 1 | 13 |
| UBA52 | ubiquitin A-52 residue ribosomal protein fusion product 1 | 1 |
| ROBO1 | roundabout, axon guidance receptor, homolog 1 (Drosophila) | 10 |
| ROR2 | receptor tyrosine kinase-like orphan receptor 2 | 30 |
| RPH3AL | rabphilin 3A-like (without C2 domains) | 10 |
| RUNX2 | runt-related transcription factor 2 | 1 |
| SALL1 | sal-like 1 (Drosophila) | 31 |
| SALL3 | sal-like 3 (Drosophila) | 51 |
| SLC6A19 | solute carrier family 6 (neurotransmitter transporter, GABA), member 1 | 1 |
| SLC6A4 | solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 | 20 |
| SFRP1 | secreted frizzled-related protein 1 | 105 |
| SARP2 | secreted frizzled-related protein 1 | 235 |
| SFRP2 | secreted frizzled-related protein 2 | 71 |
| FRZB | frizzled-related protein | 63 |
| SFRP4 | secreted frizzled-related protein 4 | 3 |
| SFRP5 | secreted frizzled-related protein 5 | 2 |
| SH3GL2 | SH3-domain GRB2-like 2 | 51 |
| SHH | sonic hedgehog | 10 |
| SIGIRR | single immunoglobulin and toll-interleukin 1 receptor (TIR) domain | 1 |
| MAPKAP1 | mitogen-activated protein kinase associated protein 1 | 1 |
| SIX3 | SIX homeobox 3 | 9 |
| SKI | v-ski sarcoma viral oncogene homolog (avian) | 1 |
| LBXCOR1 | SKI family transcriptional corepressor 1 | 10 |
| SLIT2 | slit homolog 2 (Drosophila) | 64 |
| SLIT3 | slit homolog 3 (Drosophila) | 30 |
| SMURF1 | SMAD specific E3 ubiquitin protein ligase 1 | 1 |
| SOCS1 | suppressor of cytokine signaling 1 | 233 |
| SOCS2 | suppressor of cytokine signaling 2 | 130 |
| SOSTDC1 | sclerostin domain containing 1 | 20 |
| SOX1 | SRY (sex determining region Y)-box 10 | 43 |
| SOX15 | SRY (sex determining region Y)-box 17 | 51 |
| SOX2 | SRY (sex determining region Y)-box 2 | 1 |
| SPG20 | spastic paraplegia 20 (Troyer syndrome) | 40 |
| SPRED2 | sprouty-related, EVH1 domain containing 2 | 1 |
| SPRED3 | sprouty-related, EVH1 domain containing 3 | 10 |
| SRCIN1 | v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) | 1 |
| STK38 | serine/threonine kinase 38 | 20 |
| STMN3 | stathmin-like 3 | 1 |
| SNCAIP | synuclein, alpha (non A4 component of amyloid precursor) | 41 |
| TBX1 | T-box 18 | 13 |
| TBX18 | T-box 20 | 10 |
| TCF15 | transcription factor 21 | 10 |
| TNRC18 | tenascin R | 10 |
| TCF7L1 | transcription factor 7-like 2 (T-cell specific, HMG-box) | 1 |
| TGFA | transforming growth factor, beta 1 | 1 |
| TGFB2 | transforming growth factor, beta receptor II (70/80kDa) | 13 |
| TGFBR2 | TGFB-induced factor homeobox 1 | 1 |
| THPO | Thy-1 cell surface antigen | 20 |
| TJP2 | transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) | 30 |
| TLL2 | toll-like receptor 9 | 9 |
| NGFR | nerve growth factor receptor | 9 |
| TRIM33 | tripartite motif containing 33 | 9 |
| TRIM67 | tripartite motif containing 67 | 10 |
| TH | thrombospondin 1 | 10 |
| TWIST1 | twist basic helix-loop-helix transcription factor 1 | 144 |
| UCHL1 | ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) | 121 |
| AVPR1A | arginine vasopressin receptor 1A | 10 |
| VWC2 | von Willebrand factor C domain containing 2 | 10 |
| WNK2 | WNK lysine deficient protein kinase 2 | 20 |
| WNT10B | wingless-type MMTV integration site family, member 1 | 10 |
| WNT3 | wingless-type MMTV integration site family, member 3A | 10 |
| WNT5A | wingless-type MMTV integration site family, member 5A | 10 |
| WWOX | WW domain containing oxidoreductase | 26 |
| WWTR1 | WW domain containing transcription regulator 1 | 1 |
| XDH | xanthine dehydrogenase | 40 |
| ZFYVE9 | zinc finger, FYVE domain containing 9 | 9 |
| ZMYND11 | zinc finger, MYND-type containing 11 | 1 |
| ZNF536 | zinc finger protein 536 | 10 |
