| 1. | MethDB | 11125109 | The database houses DNA methylation data irrespective of the disease, technique used, organism or the gene locus. |
| 2. | MENT | 23219992 | MENT aims to integrate the gene methylation as well as expression data across diverse cancers. |
| 3. | DiseaseMeth | 22135302 | This resource compiles methylation data from 72 human diseases across various technologies and platforms. |
| 4. | NGSmethDB | 24271385 | NGSmethDB provides whole-genome methylome maps at single nucleotide resolution for the best-assembled eukaryotic genomes. |
| 5. | PubMeth | 17932060 | Based on text mining of pubmed abstracts and manual reading and annotation of selected articles, PubMeth provides a list of genes implicated in various cancers. |
| 6. | MeInfoText | 22168213 | This database has been compiled form the literature where the words "cancer" and "methylation" have co-occurred. |
| 7. | MethyCancer | 22168213 | MethyCancer is a database that provides integrated data from DNA methylation, cancer-related gene, mutation and cancer information from public resources, and the CpG Island (CGI) clones derived from our large-scale sequencing |
| 8. | DMEAS | 23749987 | DMEAS is a tool for analyzing locus-specific and genome-wide bisulfite sequencing data by determining methylation level and entropy. |
| 9. | RRBSMAP | 22155871 | RRBSMAP (Reduced representation bisulfite sequencing) is a short-read alignment tool that is designed for handling RRBS data . |
| 10. | Bis-SNP | 22784381 | Variant caller from the bisulfite sequencing short reads aligned to the reference genome by other tools. |
| 11. | BRAT | 22457070 | Three letter bisulfite aligner. |
| 12. | CpGassoc | 22451269 | An R function for analysis of DNA methylation microarray data. |
| 13. | MethMarker | 19804638 | Software tool for designing robust and cost-efficient DNA methylation assays for six widely used methods. |
