Vaccine portal for Mycobacterium Tuberculosis

Short Read Mapping

Due to advancement in sequencing technology, it is possible to sequence any or all or selected set of genes in a single shot using Next Generation Sequencing (NGS). These NGS techniques produce sequence in form of short reads. This page provides facility to align short reads on selected or all drug targets. User can visualize and identify any mutation in newly sequenced sample.
Paired end sequencing
In case you have paired end short reads, please upload both files having forward and reverse reads, for detail (e.g. format) see example files in right column.

Upload file containing forward reads (Mate-1) :
Upload file containing reverse reads (Mate-2) :

Single end sequencing
If you have single end sequencing, please upload your file contain short reads.

Upload file containing single end reads:

Email Address:


Example files to test the module
Forward read (Mate-1) Download
Reverse read (Mate-2) Download
Single end read Download
Aligned short read Download