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Browse result page of B3Pdb
The total number entries retrieved from this search are
18
, scroll left/right for detailed information.
B3pdbID
PEPTIDE NAME
PEPTIDE SEQUENCE (1-letter)
PEPTIDE SEQUENCE (3-letter)
N-TERMINAL MODIFICATION
C-TERMINAL MODIFICATION
CHEMICAL MODIFICATION
PEPTIDE LENGTH
PEPTIDE CONFORMATION
PEPTIDE NATURE
SOURCE/ORIGIN OF PEPTIDE
SMILES
CELL LINE
In vitro
CONCENTRATION
In vitro
METHOD
In vitro
RESULT
ANIMAL MODEL
In vivo
CONCENTRATION
In vivo
MODE OF DELIVERY
In vivo
METHOD
In vivo
RESULT
ACTION
TRANSPORT TYPE
SUBCELLULAR LOCALISATION
COMBINATION
PHYSICAL CONDITION
RESPONSE
RESULT
LABEL
PMID
b3pdb_0004
NA
SLKP
SerLeuLysPro
NA
NA
5(6)-carboxyfluorescein attched to peptide
4
Linear
NA
Dodeca-neuropeptide (SLKPAANLPLRF) of frog brain.
N[C@@]([H])(CO)C(=O)N[C@@]([H])(CC(C)C)C(=O)N[C@@]([H])(CCCCN)C(=O)N1[C@@]([H])(CCC1)C(=O)O
NA
NA
NA
NA
Rat primary cortical neurons
NA
Intraperitoneal
Fourier Transform Infrared Spectroscopy
Inhibition of Aβ fibrillation
It inhibits Aβ fibrillization, moderately binds with tubulin and promotes tubulin polymerization as
NA
NA
NA
Alzheimer’s disease
NA
NA
NA
30408415
b3pdb_0005
R-Rfa
SLKPAANLPLRF
SerLeuLysProAlaAlaAsnLeuProLeuArgPhe
NA
NA
5(6)-carboxyfluorescein attched to peptide
12
Linear
NA
Dodeca-neuropeptide (SLKPAANLPLRF) of frog brain.
N[C@@]([H])(CO)C(=O)N[C@@]([H])(CC(C)C)C(=O)N[C@@]([H])(CCCCN)C(=O)N1[C@@]([H])(CCC1)C(=O)N[C@@]([H])(C)C(=O)N[C@@]([H])(C)C(=O)N[C@@]([H])(CC(=O)N)C(=O)N[C@@]([H])(CC(C)C)C(=O)N1[C@@]([H])(CCC1)C(=O)N[C@@]([H])(CC(C)C)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)N[C@@]([H])(Cc1ccccc1)C(=O)O
NA
NA
NA
NA
Rat primary cortical neurons
NA
Intraperitoneal
Fourier Transform Infrared Spectroscopy
Inhibition of Aβ fibrillation
It inhibits Aβ fibrillization, moderately binds with tubulin and promotes tubulin polymerization as
NA
NA
NA
Alzheimer’s disease
NA
NA
NA
30408415
b3pdb_0038
ApoB11
RLTRKRGLKLA
ArgLeuThrArgLysArgGlyLeuLysLeuAla
NA
5 Gly (G) and 9 Arg (R) amino acids to the C-termi
Coupled with a 9-amiNA acid arginine linker
11
NA
NA
ApoB38 peptide
N[C@@]([H])(CCCNC(=N)N)C(=O)N[C@@]([H])(CC(C)C)C(=O)N[C@@]([H])([C@]([H])(O)C)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)N[C@@]([H])(CCCCN)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)NCC(=O)N[C@@]([H])(CC(C)C)C(=O)N[C@@]([H])(CCCCN)C(=O)N[C@@]([H])(CC(C)C)C(=O)N[C@@]([H])(C)C(=O)O
Mouse cholinergic cell line Neuro2A (N2A)
100000 cells/well
Laser scanning confocal microscopy
It crosses the BBB with conguagted siRNA for alpha-syn.
Transgenic Mice
50 microgram
Intraperitoneal
Laser scanning confocal microscopy
It can transport siα-syn across the BBB as a therapeutic option for synucleinopathies.
It showed reduced accumulation of α-syn associated with amelioration of the neurodegenerative and i
NA
Neurons and glial cellsexhibiting α-syn accumulation
Combined with siRNA for alpha-syn
Lewy body disease
NA
NA
NA
30849508
b3pdb_0039
C2-9r
CDIFTNSRGKRA
CysAspIlePheThrAsnSerArgGlyLysArgAla
NA
4 Gly (G) and nine d-Arg (9r) residues to the Cter
Coupled with a 9-amiNA acid arginine linker
12
NA
NA
rhabdovirus glycoprotein
N[C@@]([H])(CS)C(=O)N[C@@]([H])(CC(=O)O)C(=O)N[C@@]([H])([C@]([H])(CC)C)C(=O)N[C@@]([H])(Cc1ccccc1)C(=O)N[C@@]([H])([C@]([H])(O)C)C(=O)N[C@@]([H])(CC(=O)N)C(=O)N[C@@]([H])(CO)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)NCC(=O)N[C@@]([H])(CCCCN)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)N[C@@]([H])(C)C(=O)O
Mouse cholinergic cell line Neuro2A (N2A)
100000 cells/well
Laser scanning confocal microscopy
It crosses the BBB with conguagted siRNA for alpha-syn.
Transgenic Mice
50 microgram
Intraperitoneal
Laser scanning confocal microscopy
It can transport siα-syn across the BBB as a therapeutic option for synucleinopathies.
It showed reduced accumulation of α-syn associated with amelioration of the neurodegenerative and i
NA
Neurons and glial cellsexhibiting α-syn accumulation
Combined with siRNA for alpha-syn
Lewy body disease
NA
NA
NA
30849508
b3pdb_0065
Ang-2
CTFFYGGSRGKRNNFKTEE
CysThrPhePheTyrGlyGlySerArgGlyLysArgAsnAsnPheLysThrGluGlu
NA
NA
NA
19
Linear
NA
Chemically synthesized
N[C@@]([H])(CS)C(=O)N[C@@]([H])([C@]([H])(O)C)C(=O)N[C@@]([H])(Cc1ccccc1)C(=O)N[C@@]([H])(Cc1ccccc1)C(=O)N[C@@]([H])(Cc1ccc(O)cc1)C(=O)NCC(=O)NCC(=O)N[C@@]([H])(CO)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)NCC(=O)N[C@@]([H])(CCCCN)C(=O)N[C@@]([H])(CCCNC(=N)N)C(=O)N[C@@]([H])(CC(=O)N)C(=O)N[C@@]([H])(CC(=O)N)C(=O)N[C@@]([H])(Cc1ccccc1)C(=O)N[C@@]([H])(CCCCN)C(=O)N[C@@]([H])([C@]([H])(O)C)C(=O)N[C@@]([H])(CCC(=O)O)C(=O)N[C@@]([H])(CCC(=O)O)C(=O)O
NA
NA
NA
NA
C57BL6 mice
1 mg/mL
Intraperitoneal
Fluorescent microscopy
Localization of the nanoparticle within the brain cells, highlighting in particular the neuron accum
Brain-targeted PLGA nanoparticles were able to cross the BBB and accumulated in neuronal cells, thus
Transcytosis
NA
Conjugated to poly(lactic-co-glycolic acid) (PLGA)
NA
NA
NA
NA
31963430
b3pdb_0140
Met-Enkephalins
YGGFM
Tyr-Gly-Gly-Phe-Met-OH
NA
NA
NA
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
20 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 2 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0141
Leu-Enkephalins
YGGFL
Tyr-Gly-Gly-Phe-Leu-OH
NA
NA
NA
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
20 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 2 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0142
Fmoc-Met-Enkephalin
YGGFM
Tyr-Gly-Gly-Phe-Met-OH
NA
NA
Addition of Fmoc group towards N terminal
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
20 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 2 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0143
Fmoc-Leu-Enkephalins
YGGFL
Tyr-Gly-Gly-Phe-Leu-OH
NA
NA
Addition of Fmoc group towards N terminal
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
20 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 4 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0144
Fmoc-Leu-Enkephalins
YGGFL
Tyr-Gly-Gly-Phe-Leu-OH
NA
NA
Addition of Fmoc group towards N terminal
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
10 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 4 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0145
HOOC-(CH2)10-Leu-Enk
YGGFL
Tyr-Gly-Gly-Phe-Leu-OH
Addition of HOOC-(CH2)10 group to Fmoc
NA
Addition of HOOC-(CH2)10 group to Fmoc
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
10 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 3 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0146
Fmoc-Leu-Enkephalins
YGGFL
Tyr-Gly-Gly-Phe-Leu-OH
NA
NA
End to end joining of two Fmoc-Leu-Enkephalin
5
Linear
NA
NA
NA
NA
NA
NA
NA
ICR male mice
10 micromole/Kg
Intraperitoneal
Hot water tail flick test
Analgesic effect seen within 3.5 seconds
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22778833
b3pdb_0147
Goldnanoparticle con
THRPPMWSPVWP
ThrHisArgProProMetTrpSerProValTrpPro
NA
NA
Conjugated with CLPFFD goldnaNAparticle
12
Linear
Cationic
Chemically synthesized
NA
NA
NA
NA
NA
Adult Sprague-Dawley rats
1.86 mg/Kg
Intraperitoneal
Instrumental neutron activation analysis and Nissl staining
Conjugate was found to cross blodd brain barrier; does not effect mice survival; no toxicity as meas
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22795856
b3pdb_0148
PACAP-TAT peptide
PACAP-YGRKKRRQRRR
PACAP-TyrGlyArgLysLysArgArgGlnArgArgArg
NA
Conjugated with TAT
NA
NA
Cyclic
Cationic
Natural from pituitary gland
NA
NA
NA
NA
NA
Male NIH mouse
100 nmol/Kg
Intraperitoneal
Fluoroscent screening by FITC labbled peptide maass in brain tissue
crosses blood brain barrier with 6.55+/-0.55% efficacy
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22939769
b3pdb_0149
PACAP-TAT peptide
PACAP-YGRKKRRQRRR
PACAP-TyrGlyArgLysLysArgArgGlnArgArgArg
NA
NA
NA
NA
Cyclic
Cationic
Natural from pituitary gland
NA
NA
NA
NA
NA
Male NIH mouse
100 nmol/Kg
Intraperitoneal
Fluoroscent screening by FITC labbled peptide maass in brain tissue
crosses blood brain barrier with 2.77+/-0.88% efficacy
NA
NA
NA
NA
Alzheimer
NA
NA
NA
22939769
b3pdb_0150
MMP-2200
Y-D-TGFLS(β-O-Glc)-CONH2
Tyr-D-Thr-Gly-Phe-Leu-Ser(β-O-Glc)-CONH2
NA
NA
Glycosylated serine residue
6
Linear
NA
Chemically synthesized
NA
NA
NA
NA
NA
Adult Sprague-Dawley rats
10mg/Kg
Intraperitoneal
Microdialysis analysis and LCMS analysis
Significant amount of peptide crosses blood brain barrier after 12 minute and remain stable up to 80
Shows potent analgesic behaviour
NA
NA
NA
Parkinson
Stability/half life
80 minute
NA
23127847
b3pdb_1208
Adiponetic peptide
LQVYGDGDHNGLYADNVN
NA
NA
NA
NA
18
Linear
NA
NA
NA
NA
NA
NA
NA
C57BL/6J mice
15 mg/kg of APNp
Intraperitoneal
Fourier Transform Infrared Spectroscopy
APNp suppressed mitochondrial and ATF4-CHOP apoptosis pathways in a Smad3 dependent manner.
NA
Permeability
NA
Alone
ICH injury in diabetic mice
NA
APNp promoted neural sur- vival following ICH injury in the diabetic setting, by suppressing mitocho
NA
31922310
b3pdb_1218
dNP2
KIKKVKKKGRKGSKIKKVKKKGRK
NA
NA
NA
NA
24
NA
Cationic
Chemically synthesized
NA
Jurkat cells
2 μM
Confocal microscopy
dNP2 enables the delivery of LRR domain of NLRX1 into T cells
C57BL/6J Mice
NA
Intraperitoneal
Confocal microscopy
dNP2 enables the delivery of LRR domain of NLRX1 into T cells
It directly inhibits the functions of effector T cells and ameliorates disease severity of EAE with
NA
NA
Combined with LRR
Encephalomyelitis
NA
NA
NA
32194859
IIITD/CB
Raghava's Group
IMTECH
CellPPDMOD