Welcome to Smith-Waterman search page of B3Pdb

This page allows users to perform similarity search against peptides in B3Pdb using Smith-Waterman algorithm. User can submit their peptide for performing similarity search and server will return the list of peptides similar to the query peptide. For more information see HELP page.

Submit Peptide Sequence for Similarity Search

Enter your peptide sequence in single letter code.( )*


* Example Blood brain barrier Penetrating Peptide