HerceptinR: Herceptin Resistance Database HerceptinR

Relative Expression/CNV of Genes
(In a pair of cell lines)


This module developed to compare gene expression or copy number variatin (CNV) of genes in user selected pair of breast cancer cell lines. It displays ratio (D1/D2) and difference (D1-D2) of gene expression, where D1 and D2 are expression of a gene in two cell lines. In addition, it also displays percentile score (ranking of a gene based on its expression/CVN) of a gene within the cell line. This way use user can identify highly overexpressed or underexpressed genes.

Here green and red colors show the sensitive and resistant status of cell line respectively, where those cell lines whic have 60% or more reports of resistance For more information, please click HERE.

Select First Cell Line
AU565 BT20 BT474 BT483 BT549 CAL120 CAL148 CAL51 CAL851 CAMA1
DU4475 EFM192A EFM19 EVSAT HCC1143 HCC1187 HCC1395 HCC1419 HCC1428 HCC1500
HCC1569 HCC1599 HCC1806 HCC1954 HCC202 HCC2157 HCC2218 HCC38 HCC70 HMC18
HS281T HS343T HS578T HS739T HS742T JIMT1 KPL1 MCF7 MDAMB134VI MDAMB231
MDAMB361 MDAMB415 MDAMB436 MDAMB453 MDAMB468 SKBR3 T47D UACC812 UACC893 ZR751
ZR7530

Select Second Cell Line
AU565 BT20 BT474 BT483 BT549 CAL120 CAL148 CAL51 CAL851 CAMA1
DU4475 EFM192A EFM19 EVSAT HCC1143 HCC1187 HCC1395 HCC1419 HCC1428 HCC1500
HCC1569 HCC1599 HCC1806 HCC1954 HCC202 HCC2157 HCC2218 HCC38 HCC70 HMC18
HS281T HS343T HS578T HS739T HS742T JIMT1 KPL1 MCF7 MDAMB134VI MDAMB231
MDAMB361 MDAMB415 MDAMB436 MDAMB453 MDAMB468 SKBR3 T47D UACC812 UACC893 ZR751
ZR7530

Sensitive cell lines    Resistant cell lines

  Select data type    Expression    CNVs