HerceptinR: Herceptin Resistance Database HerceptinR


Name of Resource/Database/Software Reference or Publications
CCLE: Three major informations: 1) Mutational, 2) Expression 3) Copy Number Variations and 4) Drug sensitivity profiles of different breast cancer cell lines, has been acquired from this database. We acknowledge the developers of CCLE.

Barretina, J. et. al. (2012), The Cancer Cell Line Encyclopedia enables predictive modeling of anticancer drug sensitivity. 483: 603-607. [PMID: 22460905]

COSMIC: Data of 138 anti-cancer drugs tested across 51 breast cancer cell lines has been taken from COSMIC database. We acknowledge the COSMIC database developers.

Garnetti, M.J. et. al., (2012), Systematic identification of genomic markers of drug sensitivity in cancer cells. 483: 570-575. [PMID: 22460902]

Assay Data: We have explored 277 research articles published in last ten years, from PUBMED. We acknowledge all the authors for the assay data provided in their research articles.

Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol., 292: 195-202.[PMID: 10493868]