| MetaTrans |
A deep learning, Transformer-based architecture for predicting metabolites of small molecules in humans. |
34094473 |
| MelonnPan |
Predicts metabolite features from amplicon or metagenomic sequencing data, aiding in microbial profiling. |
31316056 |
| MICOM |
Mathematical modeling framework to simulate microbial interactions and predict metabolic interactions. |
31964767 |
| PredCMB |
Predicts changes in microbial metabolites from shotgun metagenome data. |
39814067 |
| ENVIM |
Elastic net model-based tool for predicting metabolites using microbiome data. |
34760716 |
| METABOLIC |
Profiles microbial genomes for functional traits, including metabolic capabilities. |
35172890 |
| MetaPredictor |
Predicts human metabolites for small molecules. |
39082648 |
| MMINP |
Microbe-metabolite interactions-based metabolic profiles predictor. |
37306408 |
| BioTransformer |
A comprehensive computational tool for small molecule metabolism prediction and metabolite identification. |
30612223 |
| antiSMASH |
Rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. |
21672958 |
| MicrobeRX |
A tool for enzymatic-reaction-based metabolite prediction in the gut microbiome. |
40108657 |