Exclusive motif information
We have also anlayzed the exclusive immunostimulatory motifs and Non-immunostimulatory motifs from our dataset. These motifs were extracted using MERCI program. Here we are listing the most frequent immunostimulatory motifs from our positive dataset and most frequent non-immunostimalatory motifs from negative dataset.
Table 1: Exclusive immunostimulatory motifs and their frequency in our dataset
Immunomodulatory Motifs | Frequency |
---|---|
A A A gap A A gap A A gap A | 270 |
A A gap A A A gap A A gap A A | 268 |
A gap A A A A gap A A gap A | 268 |
A A A A A A | 267 |
A A A gap G gap A gap A A A gap A gap G | 266 |
A A gap A A A gap A gap G gap A A | 194 |
A gap A gap G gap C gap A A A | 141 |
A A gap G gap C gap A gap A A | 139 |
A gap A A gap G gap G gap A gap A gap A | 103 |
G gap A A A A gap A gap A | 98 |
Table 2: Exclusive Non-immunostimulatory motifs and their frequency in our dataset
Non-immunomodulatory Motifs | Frequency |
---|---|
C gap G gap G gap G gap G G gap G | 81 |
G gap C gap G gap G G G | 66 |
C gap G gap G gap G G G | 66 |
C gap C gap C gap G G G | 62 |
G gap C gap G G G | 61 |
C gap G gap G G gap G | 59 |
A gap G C gap G gap G G gap G | 59 |
C gap G gap G G G | 55 |
G gap C gap G gap G G | 54 |
A G gap G C gap G gap A G | 53 |