Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Epitope Search

This page is designed to facilitate the user to search cancer-specific epitope database using keywords. This database contains epitopes present in mutated regions of 60 cancer vaccine candidates belonging to 905 cancer cell lines. This module allows the user to perform search or display information on user selected fields. For more information see HELP page.
Search Options
Insert Keyword for Information Search:     

Select field to be searched :

Missense, Frameshift Insertions and Frameshift Deletions Inframe Insertions and Inframe Deletions

Select Fields to be SEARCHED in Cancertope:

 Protein Name  Neoepitopes[]
 Refseq ID Mismatch Frequency
 Protein Mutation[] Cell Line Frequency
 cDNA Mutation[]
Mutation Type
Mutation Type
 Cell Line [] Tissue of Origin

Display Options (Select desired field):

 Protein Name  Neoepitopes  Tissue of origin   Position
 Mutation Protein
  Mutation cDNA
  Mutation Type
  Num of Mismatches
 Cell Line Frequency
  Cell Line
  MHC I Binders
  MHC II Binders
 B Cell Epitopes
  CTL Epitopes
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