Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 20 299 XP_006713721 20 299 XP_005250923 20 390 NP_055194 20 390 NP_004095 17 2528 NP_071365 16 5631 XP_005260285 16 5631 XP_006723916 16 5631 NP_073742 16 7355 NP_998765 16 7355 XP_005254329 16 7355 NP_004903 15 9605 NP_001013424 15 9605 NP_919438 15 9605 NP_919437 15 9605 NP_919436 15 9605 NP_009210 15 9605 NP_001012496 15 9605 NP_525022 15 9605 NP_006205 15 9605 NP_001032626 15 9605 NP_001268695 15 9605 NP_079511 15 9605 NP_872272 15 9605 NP_775764 15 9605 NP_006648 15 9605 NP_996848 15 9605 NP_004430 15 9605 NP_001268694 15 9605 NP_001268696 15 9605 XP_006724025 15 9605 XP_006724024 15 9605 XP_006724023 15 9605 XP_006723057 15 9605 XP_005256994 15 9605 XP_005256993 15 9605 XP_005256992 15 9605 XP_006721697 15 9605 XP_006721696 15 9605 XP_005256991 15 9605 XP_005267366 15 9605 XP_006720083 15 9605 XP_006720082 15 9605 XP_005270242 15 9605 XP_005252526 15 9605 XP_006716227 15 9605 XP_005250726 15 9605 XP_006716226 15 9605 XP_005250725 15 9605 XP_005250724 15 9605 XP_006716225 15 9605 XP_005250722 15 9605 XP_005250723 15 9605 XP_005250721 15 9605 XP_005250720 15 9605 XP_005250719 15 9605 XP_006716224 15 9605 XP_005250717 15 9605 XP_006716223 15 9605 XP_005245543 15 9605 NP_694591 15 9605>NP_006209 Length = 1068 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YVSVNIRDI 9 YV+VNIRDI Sbjct: 343 YVNVNIRDI 351>XP_006713721 Length = 1068 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YVSVNIRDI 9 YV+VNIRDI Sbjct: 343 YVNVNIRDI 351>XP_005250923 Length = 500 Score = 20.0 bits (40), Expect = 390 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YVSVNIRDI 9 Y+SVN+RD+ Sbjct: 463 YISVNLRDV 471>NP_055194 Length = 500 Score = 20.0 bits (40), Expect = 390 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YVSVNIRDI 9 Y+SVN+RD+ Sbjct: 463 YISVNLRDV 471>NP_004095 Length = 2511 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 Y S+N RDI Sbjct: 1568 YASLNFRDI 1576>NP_071365 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSVNIRDI 9 +SVNI+D+ Sbjct: 356 ISVNIQDL 363>XP_005260285 Length = 430 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSVNIRDI 9 +SVNI+D+ Sbjct: 350 ISVNIQDL 357>XP_006723916 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSVNIRDI 9 +SVNI+D+ Sbjct: 376 ISVNIQDL 383>NP_073742 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 YVSVNIRDI 9 Y++V+++D+ Sbjct: 188 YITVSVKDL 196>NP_998765 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVSVNIR 7 Y SVN+R Sbjct: 496 YTSVNVR 502>XP_005254329 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVSVNIR 7 Y SVN+R Sbjct: 128 YTSVNVR 134>NP_004903 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>NP_001013424 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 611 YVGVNIKGL 619>NP_919438 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>NP_919437 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>NP_919436 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>NP_009210 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YVSVNIRD 8 YV +N+ D Sbjct: 307 YVDINVTD 314>NP_001012496 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YVSVNIRD 8 YV +N+ D Sbjct: 307 YVDINVTD 314>NP_525022 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 240 YVSVNV 245>NP_006205 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 SVN++DI Sbjct: 317 SVNLKDI 323>NP_001032626 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 SVN++DI Sbjct: 217 SVNLKDI 223>NP_001268695 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 457 YVSVNV 462>NP_079511 Length = 1166 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVNIRDI 9 SVN RDI Sbjct: 516 SVNCRDI 522>NP_872272 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 457 YVSVNV 462>NP_775764 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VNIRDI 9 VN+RDI Sbjct: 132 VNVRDI 137>NP_006648 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSVNIRDI 9 V +N+RDI Sbjct: 498 VLINLRDI 505>NP_996848 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSVNIRDI 9 V +N+RDI Sbjct: 498 VLINLRDI 505>NP_004430 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 457 YVSVNV 462>NP_001268694 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 457 YVSVNV 462>NP_001268696 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 457 YVSVNV 462>XP_006724025 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSVNIRDI 9 V +N+RDI Sbjct: 541 VLINLRDI 548>XP_006724024 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSVNIRDI 9 V +N+RDI Sbjct: 541 VLINLRDI 548>XP_006724023 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSVNIRDI 9 V +N+RDI Sbjct: 498 VLINLRDI 505>XP_006723057 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 YVSVNIRD 8 YV +N+ D Sbjct: 143 YVDINVTD 150>XP_005256994 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 248 YVSVNV 253>XP_005256993 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 159 YVSVNV 164>XP_005256992 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 159 YVSVNV 164>XP_006721697 Length = 1625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 248 YVSVNV 253>XP_006721696 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 248 YVSVNV 253>XP_005256991 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YVSVNI 6 YVSVN+ Sbjct: 248 YVSVNV 253>XP_005267366 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 ++NIRD+ Sbjct: 1071 AINIRDV 1077>XP_006720083 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 ++NIRD+ Sbjct: 1044 AINIRDV 1050>XP_006720082 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 ++NIRD+ Sbjct: 1071 AINIRDV 1077>XP_005270242 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVNIRDI 9 SVN RDI Sbjct: 84 SVNCRDI 90>XP_005252526 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 SVN++DI Sbjct: 244 SVNLKDI 250>XP_006716227 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 611 YVGVNIKGL 619>XP_005250726 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_006716226 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250725 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250724 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_006716225 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250722 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250723 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250721 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250720 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250719 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_006716224 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005250717 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_006716223 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV VNI+ + Sbjct: 659 YVGVNIKGL 667>XP_005245543 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVSVNIRDI 9 YV+ NIR + Sbjct: 178 YVNANIRTL 186>NP_694591 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SVNIRDI 9 ++NIRD+ Sbjct: 1071 AINIRDV 1077Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.146 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 374,433 Number of extensions: 618 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |