Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 19 665 NP_004439 19 665 NP_001276865 19 665 NP_001005862 19 665 XP_005257197 19 665 XP_006721828 19 665 NP_660317 17 4312 NP_001182315 17 4312 NP_001182316 17 4312 NP_006276 17 4312 XP_005257146 17 4312 XP_005270412 17 4312 XP_006710350 17 4312 NP_009101 17 4312 NP_848519 16 5631 NP_036251 16 5631 NP_001164110 16 5631 NP_005406 16 5631 NP_001034892 16 5631 NP_060496 16 5631 NP_001768 16 5631 NP_942088 16 5631 XP_005251917 16 5631 XP_005247966 16 5631 XP_005247965 16 5631 XP_006712775 16 5631 XP_005263800 16 5631 NP_001005174 16 5631 NP_001005289 16 5631 NP_004817 16 7355 NP_001277716 16 7355 NP_003881 16 7355 NP_443188 16 7355 NP_006081 16 7355 NP_001007795 16 7355 XP_006721081 16 7355 XP_005255143 16 7355 XP_006721080 16 7355 XP_006721079 16 7355 XP_005255141 16 7355 XP_006710348 16 7355 XP_006710019 16 7355 NP_940962 15 9605 NP_945351 15 9605 NP_001005175 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_009145 15 9605 XP_006723868 15 9605 XP_005252970 15 9605 XP_005252969 15 9605 XP_005250386 15 9605 XP_005250384 15 9605 XP_005248564 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_005900 15 9605 NP_001254479 15 9605>NP_001276866 Length = 1055 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YVMA VGSP Sbjct: 772 YVMAGVGSP 780>NP_004439 Length = 1255 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YVMA VGSP Sbjct: 772 YVMAGVGSP 780>NP_001276865 Length = 1240 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YVMA VGSP Sbjct: 757 YVMAGVGSP 765>NP_001005862 Length = 1225 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YVMA VGSP Sbjct: 742 YVMAGVGSP 750>XP_005257197 Length = 1225 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YVMA VGSP Sbjct: 742 YVMAGVGSP 750>XP_006721828 Length = 1336 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YVMA VGSP Sbjct: 853 YVMAGVGSP 861>NP_660317 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +V+AV+G P Sbjct: 207 FVLAVIGLP 215>NP_001182315 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +V+AV+G P Sbjct: 207 FVLAVIGLP 215>NP_001182316 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +V+AV+G P Sbjct: 207 FVLAVIGLP 215>NP_006276 Length = 626 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAVVGSP 9 +AVVGSP Sbjct: 215 LAVVGSP 221>XP_005257146 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +V+AV+G P Sbjct: 207 FVLAVIGLP 215>XP_005270412 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAVVGSP 9 +AVVGSP Sbjct: 165 LAVVGSP 171>XP_006710350 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAVVGSP 9 +AVVGSP Sbjct: 214 LAVVGSP 220>NP_009101 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAVVGSP 9 +AVVGSP Sbjct: 214 LAVVGSP 220>NP_848519 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YV+ ++G+P Sbjct: 207 YVLRILGTP 215>NP_036251 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YV+ ++G+P Sbjct: 194 YVLRILGTP 202>NP_001164110 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YV+ ++G+P Sbjct: 194 YVLRILGTP 202>NP_005406 Length = 679 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAVVGSP 9 Y MA+ G P Sbjct: 421 YTMAICGMP 429>NP_001034892 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YV+ ++G+P Sbjct: 215 YVLRILGTP 223>NP_060496 Length = 963 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MAVVGSP 9 +A+VGSP Sbjct: 806 LAIVGSP 812>NP_001768 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++AVVG Sbjct: 249 YILAVVG 255>NP_942088 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++AVVG Sbjct: 249 YILAVVG 255>XP_005251917 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 YV+ ++G+P Sbjct: 220 YVLRILGTP 228>XP_005247966 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++AVVG Sbjct: 249 YILAVVG 255>XP_005247965 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++AVVG Sbjct: 249 YILAVVG 255>XP_006712775 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAVVGSP 9 Y MA+ G P Sbjct: 168 YTMAICGMP 176>XP_005263800 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAVVGSP 9 Y MA+ G P Sbjct: 168 YTMAICGMP 176>NP_001005174 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YVMAVVGS 8 Y++AVVG+ Sbjct: 37 YIIAVVGN 44>NP_001005289 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YVMAVVGS 8 Y++AVVG+ Sbjct: 43 YIVAVVGN 50>NP_004817 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 Y+M +VG P Sbjct: 505 YMMVMVGYP 513>NP_001277716 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 Y+M +VG P Sbjct: 505 YMMVMVGYP 513>NP_003881 Length = 5405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAVVGSP 9 YV+A G P Sbjct: 1697 YVLATTGCP 1705Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAVVGSP 9 YV+A G P Sbjct: 2898 YVLATTGCP 2906Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAVVGSP 9 YV+A G P Sbjct: 4099 YVLATTGCP 4107>NP_443188 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AVVGSP Sbjct: 498 AVVGSP 503>NP_006081 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +++AV+G P Sbjct: 224 HLLAVIGGP 232>NP_001007795 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +++AV+G P Sbjct: 224 HLLAVIGGP 232>XP_006721081 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AVVGSP Sbjct: 278 AVVGSP 283>XP_005255143 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AVVGSP Sbjct: 318 AVVGSP 323>XP_006721080 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AVVGSP Sbjct: 437 AVVGSP 442>XP_006721079 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AVVGSP Sbjct: 464 AVVGSP 469>XP_005255141 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AVVGSP Sbjct: 498 AVVGSP 503>XP_006710348 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YVMAVVGSP 9 +++AV+G P Sbjct: 224 HLLAVIGGP 232>XP_006710019 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YVMAVVGS 8 Y MAV+GS Sbjct: 219 YQMAVMGS 226>NP_940962 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++A++G Sbjct: 177 YILAIIG 183>NP_945351 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++A++G Sbjct: 190 YILAIIG 196>NP_001005175 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YVMAVVGS 8 YV+A+VG+ Sbjct: 37 YVVAMVGN 44>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 +V AV+G P Sbjct: 7955 HVEAVIGEP 7963>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 +V AV+G P Sbjct: 7028 HVEAVIGEP 7036>NP_009145 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VMAVVGS 8 VMAV+GS Sbjct: 435 VMAVLGS 441>XP_006723868 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVVGSP 9 AV+GSP Sbjct: 262 AVIGSP 267>XP_005252970 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YVMAVVGS 8 YV+A+VG+ Sbjct: 37 YVVAMVGN 44>XP_005252969 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YVMAVVGS 8 YV+A+VG+ Sbjct: 37 YVVAMVGN 44>XP_005250386 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++A++G Sbjct: 190 YILAIIG 196>XP_005250384 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 YVMAVVG 7 Y++A++G Sbjct: 190 YILAIIG 196>XP_005248564 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YVMAVV 6 YVMAVV Sbjct: 918 YVMAVV 923>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 +V AV+G P Sbjct: 7956 HVEAVIGEP 7964>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 +V AV+G P Sbjct: 7956 HVEAVIGEP 7964>NP_005900 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YVMAVV 6 YVMAVV Sbjct: 1044 YVMAVV 1049>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAVVGSP 9 +V AV+G P Sbjct: 8272 HVEAVIGEP 8280Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.135 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 524,060 Number of extensions: 663 Number of successful extensions: 60 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |