Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 299 NP_001186704 18 1135 NP_001295 18 1135 NP_001120652" target = "next">NP_001120652 18 1482 NP_000251 18 1482 XP_006718624 18 1482 XP_005274069 18 1482 XP_006718623 18 1482 XP_006718622 18 1482 XP_006718621 18 1482 XP_005248564 17 2528 NP_005900 17 2528 NP_001120 17 3301 NP_776256 17 4312 NP_001032900 16 5631 NP_569118 16 5631 NP_932065 16 5631 NP_932064 16 5631 NP_004484 16 5631 XP_005254562 16 5631 XP_006720650 16 5631 XP_005254559 16 5631 XP_006720649 16 5631 XP_005254557 16 5631 NP_001460 16 7355 NP_001275905 16 7355 NP_001275907 16 7355 NP_004590 16 7355 NP_001180380 16 7355 XP_006724373 16 7355 XP_005253558 16 7355 XP_005253557 16 7355 XP_006719219 16 7355 XP_005253556 16 7355 XP_005253555 16 7355 NP_631899 16 7355 NP_001070710 16 7355 NP_003550 15 9605 NP_005019 15 9605 XP_006725428 15 9605 XP_006725427 15 9605 XP_006725426 15 9605 XP_006722195 15 9605 XP_006722194 15 9605 XP_006722193 15 9605 XP_006717513 15 9605>NP_005219 Length = 1210 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YVMA VDNP Sbjct: 764 YVMASVDNP 772>NP_001186704 Length = 1133 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YVMAIVDNP 9 YVM I DNP Sbjct: 292 YVMEISDNP 300>NP_001295 Length = 1380 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YVMAIVDNP 9 YVM I DNP Sbjct: 539 YVMEISDNP 547>NP_001120652" target = "next">NP_001120652 Length = 2175 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1569 YVVALQDNP 1577>NP_000251 Length = 2215 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1607 YVVALQDNP 1615>XP_006718624 Length = 2177 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1569 YVVALQDNP 1577>XP_005274069 Length = 2176 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1569 YVVALQDNP 1577>XP_006718623 Length = 2189 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1569 YVVALQDNP 1577>XP_006718622 Length = 2190 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1569 YVVALQDNP 1577>XP_006718621 Length = 2225 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YVMAIVDNP 9 YV+A+ DNP Sbjct: 1605 YVVALQDNP 1613>XP_005248564 Length = 2342 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YVMAIVD 7 YVMA+VD Sbjct: 918 YVMAVVD 924>NP_005900 Length = 2468 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YVMAIVD 7 YVMA+VD Sbjct: 1044 YVMAVVD 1050>NP_001120 Length = 1158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YVMAIVDNP 9 Y M I DNP Sbjct: 600 YAMEISDNP 608>NP_776256 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MAIVDNP 9 MA++DNP Sbjct: 256 MALLDNP 262>NP_001032900 Length = 252 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AI++NP Sbjct: 228 VQAIIENP 235>NP_569118 Length = 882 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 681 YVVVVIDN 688>NP_932065 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 697 YVVVVIDN 704>NP_932064 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 697 YVVVVIDN 704>NP_004484 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AI++NP Sbjct: 237 VQAIIENP 244>XP_005254562 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 278 YVVVVIDN 285>XP_006720650 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 697 YVVVVIDN 704>XP_005254559 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 697 YVVVVIDN 704>XP_006720649 Length = 855 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 654 YVVVVIDN 661>XP_005254557 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YVMAIVDN 8 YV+ ++DN Sbjct: 697 YVVVVIDN 704>NP_001460 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAIVDNP 9 YV+ +DNP Sbjct: 103 YVLQELDNP 111>NP_001275905 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAIVDNP 9 YV+ +DNP Sbjct: 103 YVLQELDNP 111>NP_001275907 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YVMAIVDNP 9 YV+ +DNP Sbjct: 53 YVLQELDNP 61>NP_004590 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VMAIVDNP 9 VMA V NP Sbjct: 265 VMAAVQNP 272>NP_001180380 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_006724373 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VMAIVDNP 9 VMA V NP Sbjct: 235 VMAAVQNP 242>XP_005253558 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_005253557 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_006719219 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_005253556 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_005253555 Length = 966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VMAIVDNP 9 V AIV+NP Sbjct: 54 VWAIVNNP 61>NP_631899 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAIVDNP 9 Y MA+ NP Sbjct: 354 YFMAVAANP 362>NP_001070710 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YVMAIVDNP 9 Y MA+ NP Sbjct: 363 YFMAVAANP 371>NP_003550 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 363 YFMAIID 369>NP_005019 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 353 YFMAIID 359>XP_006725428 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 204 YFMAIID 210>XP_006725427 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 299 YFMAIID 305>XP_006725426 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 299 YFMAIID 305>XP_006722195 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 204 YFMAIID 210>XP_006722194 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 299 YFMAIID 305>XP_006722193 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 299 YFMAIID 305>XP_006717513 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YVMAIVD 7 Y MAI+D Sbjct: 302 YFMAIID 308Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.141 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,020 Number of extensions: 499 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |