Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_001093143 16 5631 NP_001093142 16 5631 NP_001093141 16 5631 NP_001093140 16 5631 NP_061759 16 5631 NP_001240813 16 7355 NP_006085 16 7355 NP_001157743 16 7355 NP_872584 16 7355 NP_061757 16 7355 NP_079420 16 7355 NP_001095876 16 7355 XP_005253689 16 7355 XP_006719761 16 7355 XP_005273432 16 7355 XP_005273431 16 7355 XP_005263305 16 7355 XP_005263304 16 7355 XP_006714389 16 7355 XP_005263303 16 7355 XP_005263302 16 7355 NP_001177900 16 7355 NP_004755 16 7355 NP_001154803 15 9605 NP_001154802 15 9605 NP_061857 15 9605 NP_055507 15 9605 NP_203747 15 9605 NP_001269058 15 9605 NP_694984 15 9605 NP_775885 15 9605 NP_659570 15 9605 NP_001004060 15 9605 NP_001004067 15 9605 XP_006725258 15 9605 XP_006724701 15 9605 XP_005262172 15 9605 XP_005262170 15 9605 XP_006722212 15 9605 XP_005258116 15 9605 XP_005258115 15 9605 XP_005255375 15 9605 XP_005269043 15 9605 XP_006719529 15 9605 XP_005269042 15 9605 XP_005269041 15 9605 XP_005250299 15 9605 XP_006715978 15 9605 XP_006715977 15 9605 XP_006715976 15 9605 XP_006715975 15 9605 NP_055384 15 9605 NP_055102 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 2437 YTVKVQREL 2445>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 1089 YTVKVQREL 1097>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 2089 YTVKVQREL 2097>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 2431 YTVKVQREL 2439>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 2437 YTVKVQREL 2445>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 2437 YTVKVQREL 2445>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YTVNVQREL 9 YTV VQREL Sbjct: 2437 YTVKVQREL 2445>NP_001093143 Length = 100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VNVQREL 9 VNVQ+EL Sbjct: 55 VNVQKEL 61>NP_001093142 Length = 100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VNVQREL 9 VNVQ+EL Sbjct: 55 VNVQKEL 61>NP_001093141 Length = 100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VNVQREL 9 VNVQ+EL Sbjct: 55 VNVQKEL 61>NP_001093140 Length = 100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VNVQREL 9 VNVQ+EL Sbjct: 55 VNVQKEL 61>NP_061759 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YTVNVQ 6 YTVN+Q Sbjct: 317 YTVNIQ 322>NP_001240813 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 448 NVQREL 453>NP_006085 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVNVQR 7 TVNVQR Sbjct: 644 TVNVQR 649>NP_001157743 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVNVQR 7 TVNVQR Sbjct: 570 TVNVQR 575>NP_872584 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVNVQR 7 TVNVQR Sbjct: 1081 TVNVQR 1086>NP_061757 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YTVNVQ 6 YT+N+Q Sbjct: 315 YTINIQ 320>NP_079420 Length = 1244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 526 NVQREL 531>NP_001095876 Length = 1244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 526 NVQREL 531>XP_005253689 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 433 NVQREL 438>XP_006719761 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 433 NVQREL 438>XP_005273432 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVNVQR 7 TVNVQR Sbjct: 678 TVNVQR 683>XP_005273431 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVNVQR 7 TVNVQR Sbjct: 1081 TVNVQR 1086>XP_005263305 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 448 NVQREL 453>XP_005263304 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 448 NVQREL 453>XP_006714389 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 506 NVQREL 511>XP_005263303 Length = 1245 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 526 NVQREL 531>XP_005263302 Length = 1245 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 526 NVQREL 531>NP_001177900 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 433 NVQREL 438>NP_004755 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVQREL 9 NVQREL Sbjct: 433 NVQREL 438>NP_001154803 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 348 YILNVTREI 356>NP_001154802 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 337 YILNVTREI 345>NP_061857 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 337 YILNVTREI 345>NP_055507 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YTVNVQR 7 YT NV+R Sbjct: 152 YTANVKR 158>NP_203747 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 336 YILNVTREI 344>NP_001269058 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 363 YILNVTREI 371>NP_694984 Length = 1802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YTVNVQRE 8 Y+VN+Q++ Sbjct: 966 YSVNLQKQ 973>NP_775885 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YTVNVQRE 8 YT++ Q+E Sbjct: 375 YTIHAQKE 382>NP_659570 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>NP_001004060 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YTVNVQRE 8 YT++ Q+E Sbjct: 375 YTIHAQKE 382>NP_001004067 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YTVNVQRE 8 YT++ Q+E Sbjct: 375 YTIHAQKE 382>XP_006725258 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YTVNVQRE 8 YT++ Q+E Sbjct: 375 YTIHAQKE 382>XP_006724701 Length = 1398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YTVNVQRE 8 Y+VN+Q++ Sbjct: 562 YSVNLQKQ 569>XP_005262172 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YTVNVQRE 8 Y+VN+Q++ Sbjct: 795 YSVNLQKQ 802>XP_005262170 Length = 1752 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YTVNVQRE 8 Y+VN+Q++ Sbjct: 916 YSVNLQKQ 923>XP_006722212 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 314 YILNVTREI 322>XP_005258116 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 343 YILNVTREI 351>XP_005258115 Length = 1450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 363 YILNVTREI 371>XP_005255375 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YTVNVQRE 8 YT++ Q+E Sbjct: 375 YTIHAQKE 382>XP_005269043 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 25 YILNVTREI 33>XP_006719529 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 211 YILNVTREI 219>XP_005269042 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 257 YILNVTREI 265>XP_005269041 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YTVNVQREL 9 Y +NV RE+ Sbjct: 337 YILNVTREI 345>XP_005250299 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>XP_006715978 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>XP_006715977 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>XP_006715976 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>XP_006715975 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>NP_055384 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVQREL 9 N+QREL Sbjct: 127 NIQREL 132>NP_055102 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YTVNVQRE 8 YT++ Q+E Sbjct: 375 YTIHAQKE 382Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.132 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 452,005 Number of extensions: 674 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |