Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001013433                                                           23      60
NP_060785                                                              23      60
NP_361014                                                              23      60
NP_653252                                                              21     229
XP_006716483                                                           21     229
XP_005251224                                                           21     229
NP_036425                                                              20     509
XP_006711959                                                           20     509
XP_005264764                                                           20     509
NP_060664                                                              17    2528
NP_001164059                                                           17    2528
NP_001116306                                                           17    2528
NP_001164051                                                           17    2528
NP_001164058                                                           17    2528
XP_006711504                                                           17    2528
NP_001123537                                                           17    3301
NP_004136                                                              17    3301
XP_006722821                                                           17    3301
XP_006722820                                                           17    3301
XP_005259972                                                           17    3301
XP_006722819                                                           17    3301
XP_006722818                                                           17    3301
XP_005260908                                                           17    4312
XP_006723708                                                           17    4312
XP_006723707                                                           17    4312
XP_006723706                                                           17    4312
XP_006723703                                                           17    4312
XP_006723702                                                           17    4312
XP_005260900                                                           17    4312
XP_006723698                                                           17    4312
XP_006723697                                                           17    4312
XP_006723696                                                           17    4312
XP_006723695                                                           17    4312
NP_066362                                                              16    5631
NP_003632                                                              16    5631
NP_006426                                                              16    5631
NP_116196                                                              16    7355
NP_835363                                                              16    7355
NP_001245381                                                           16    7355
NP_001245382                                                           16    7355
NP_001983                                                              16    7355
NP_056121                                                              16    7355
NP_002290                                                              16    7355
NP_001135828                                                           16    7355
NP_689997                                                              16    7355
NP_055759                                                              16    7355
NP_001009566                                                           16    7355
XP_003960836                                                           16    7355
XP_003846345                                                           16    7355
XP_006717580                                                           16    7355
XP_006717579                                                           16    7355
XP_006712739                                                           16    7355
XP_005270747                                                           16    7355
XP_006710574                                                           16    7355
XP_005270746                                                           16    7355
XP_005263489                                                           16    7355
XP_003846677                                                           16    7355
NP_005520                                                              15    9605
NP_055888                                                              15    9605
NP_001627                                                              15    9605
NP_001142                                                              15    9605
NP_055737                                                              15    9605
NP_001028225                                                           15    9605
NP_001186438                                                           15    9605
NP_127497                                                              15    9605
NP_127500                                                              15    9605
NP_127499                                                              15    9605
NP_001010919                                                           15    9605
NP_001230133                                                           15    9605
NP_056400                                                              15    9605
NP_683692                                                              15    9605
NP_001263389                                                           15    9605
NP_060738                                                              15    9605
NP_057340                                                              15    9605
NP_001157787                                                           15    9605
NP_079466                                                              15    9605
NP_001186439                                                           15    9605
XP_003960344                                                           15    9605
XP_005260753                                                           15    9605
XP_005260752                                                           15    9605
XP_005260751                                                           15    9605
XP_005260750                                                           15    9605
XP_005260749                                                           15    9605
XP_005260748                                                           15    9605
XP_005260747                                                           15    9605
XP_005260746                                                           15    9605
XP_005260745                                                           15    9605
XP_006723175                                                           15    9605
XP_005258729                                                           15    9605
XP_005258728                                                           15    9605
XP_005267056                                                           15    9605
XP_006714719                                                           15    9605
XP_005248609                                                           15    9605
XP_005248608                                                           15    9605
XP_005248208                                                           15    9605
XP_005248207                                                           15    9605
XP_006714021                                                           15    9605
XP_006712951                                                           15    9605
XP_006712732                                                           15    9605
XP_006712731                                                           15    9605
XP_006712730                                                           15    9605
XP_006712729                                                           15    9605
XP_006712728                                                           15    9605
XP_006712727                                                           15    9605
XP_006712726                                                           15    9605
XP_006712725                                                           15    9605
XP_006712724                                                           15    9605
XP_005264052                                                           15    9605
XP_005263995                                                           15    9605
XP_006712580                                                           15    9605
XP_005263994                                                           15    9605
XP_006712578                                                           15    9605
XP_006712577                                                           15    9605
XP_006710661                                                           15    9605
XP_005245920                                                           15    9605
XP_006710660                                                           15    9605
XP_006710659                                                           15    9605
XP_006710658                                                           15    9605
XP_006710657                                                           15    9605
XP_006710197                                                           15    9605
NP_004819                                                              15    9605
>NP_001013433
          Length = 589

 Score = 22.7 bits (47), Expect =    60
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YTSTVRCMH 9
           +TSTVRCMH
Sbjct: 342 HTSTVRCMH 350
>NP_060785
          Length = 627

 Score = 22.7 bits (47), Expect =    60
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YTSTVRCMH 9
           +TSTVRCMH
Sbjct: 380 HTSTVRCMH 388
>NP_361014
          Length = 707

 Score = 22.7 bits (47), Expect =    60
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   YTSTVRCMH 9
           +TSTVRCMH
Sbjct: 460 HTSTVRCMH 468
>NP_653252
          Length = 1463

 Score = 20.8 bits (42), Expect =   229
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  YTSTVRCMH 9
          + STVRCMH
Sbjct: 31 FKSTVRCMH 39
>XP_006716483
          Length = 1367

 Score = 20.8 bits (42), Expect =   229
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  YTSTVRCMH 9
          + STVRCMH
Sbjct: 31 FKSTVRCMH 39
>XP_005251224
          Length = 1439

 Score = 20.8 bits (42), Expect =   229
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  YTSTVRCMH 9
          + STVRCMH
Sbjct: 31 FKSTVRCMH 39
>NP_036425
          Length = 1479

 Score = 19.6 bits (39), Expect =   509
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  YTSTVRCMH 9
          + +TVRCMH
Sbjct: 43 FRTTVRCMH 51
>XP_006711959
          Length = 1388

 Score = 19.6 bits (39), Expect =   509
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  YTSTVRCMH 9
          + +TVRCMH
Sbjct: 43 FRTTVRCMH 51
>XP_005264764
          Length = 1455

 Score = 19.6 bits (39), Expect =   509
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  YTSTVRCMH 9
          + +TVRCMH
Sbjct: 43 FRTTVRCMH 51
>NP_060664
          Length = 493

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   YTSTVRCMH 9
           +T TVRC++
Sbjct: 171 FTLTVRCLY 179
>NP_001164059
          Length = 428

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   YTSTVRCMH 9
           +T TVRC++
Sbjct: 106 FTLTVRCLY 114
>NP_001116306
          Length = 493

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   YTSTVRCMH 9
           +T TVRC++
Sbjct: 171 FTLTVRCLY 179
>NP_001164051
          Length = 493

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   YTSTVRCMH 9
           +T TVRC++
Sbjct: 171 FTLTVRCLY 179
>NP_001164058
          Length = 494

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   YTSTVRCMH 9
           +T TVRC++
Sbjct: 172 FTLTVRCLY 180
>XP_006711504
          Length = 527

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   YTSTVRCMH 9
           +T TVRC++
Sbjct: 205 FTLTVRCLY 213
>NP_001123537
          Length = 2022

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>NP_004136
          Length = 2157

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>XP_006722821
          Length = 1462

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>XP_006722820
          Length = 2140

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>XP_005259972
          Length = 2141

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>XP_006722819
          Length = 2156

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>XP_006722818
          Length = 2157

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   YTSTVRCMH 9
           YT  V C+H
Sbjct: 572 YTDNVGCIH 580
>XP_005260908
          Length = 402

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 110 TVRCFH 115
>XP_006723708
          Length = 435

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723707
          Length = 489

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723706
          Length = 560

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723703
          Length = 823

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723702
          Length = 825

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_005260900
          Length = 826

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723698
          Length = 876

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723697
          Length = 882

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 110 TVRCFH 115
>XP_006723696
          Length = 882

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>XP_006723695
          Length = 883

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   TVRCMH 9
           TVRC H
Sbjct: 111 TVRCFH 116
>NP_066362
          Length = 133

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   YTSTVRCMH 9
           Y ST +C++
Sbjct: 99  YASTAKCLN 107
>NP_003632
          Length = 125

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  YTSTVRCMH 9
          Y ST +C++
Sbjct: 78 YASTAKCLN 86
>NP_006426
          Length = 132

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   YTSTVRCMH 9
           Y ST +C++
Sbjct: 98  YASTAKCLN 106
>NP_116196
          Length = 1094

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           YT+T +C
Sbjct: 347 YTATTKC 353
>NP_835363
          Length = 1043

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           YT+T +C
Sbjct: 296 YTATTKC 302
>NP_001245381
          Length = 986

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           YT+T +C
Sbjct: 222 YTATTKC 228
>NP_001245382
          Length = 969

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           YT+T +C
Sbjct: 222 YTATTKC 228
>NP_001983
          Length = 425

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   YTSTVRCM 8
           Y S +RC+
Sbjct: 290 YVSIIRCL 297
>NP_056121
          Length = 2620

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    YTSTVRC 7
            +TSTV C
Sbjct: 1327 FTSTVAC 1333
>NP_002290
          Length = 1927

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1    YTSTVRC 7
            Y S VRC
Sbjct: 1831 YASVVRC 1837
>NP_001135828
          Length = 285

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           +TS VRC
Sbjct: 267 FTSQVRC 273
>NP_689997
          Length = 798

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   YTSTVRCMH 9
           YT ++ C+H
Sbjct: 146 YTGSLFCVH 154
>NP_055759
          Length = 971

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TSTVRCMH 9
           TST++C +
Sbjct: 614 TSTIKCFN 621
>NP_001009566
          Length = 981

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TSTVRCMH 9
           TST++C +
Sbjct: 624 TSTIKCFN 631
>XP_003960836
          Length = 219

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  STVRCMH 9
          STV C+H
Sbjct: 8  STVPCVH 14
>XP_003846345
          Length = 219

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  STVRCMH 9
          STV C+H
Sbjct: 8  STVPCVH 14
>XP_006717580
          Length = 1043

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           YT+T +C
Sbjct: 296 YTATTKC 302
>XP_006717579
          Length = 1180

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           YT+T +C
Sbjct: 433 YTATTKC 439
>XP_006712739
          Length = 285

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           +TS VRC
Sbjct: 267 FTSQVRC 273
>XP_005270747
          Length = 2025

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YTSTVRC 7
           +TSTV C
Sbjct: 732 FTSTVAC 738
>XP_006710574
          Length = 2445

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    YTSTVRC 7
            +TSTV C
Sbjct: 1152 FTSTVAC 1158
>XP_005270746
          Length = 2443

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    YTSTVRC 7
            +TSTV C
Sbjct: 1152 FTSTVAC 1158
>XP_005263489
          Length = 962

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   TSTVRCMH 9
           TST++C +
Sbjct: 605 TSTIKCFN 612
>XP_003846677
          Length = 219

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  STVRCMH 9
          STV C+H
Sbjct: 8  STVPCVH 14
>NP_005520
          Length = 4391

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3227 HTATLRC 3233
>NP_055888
          Length = 1781

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    YTSTVRCM 8
            YTS+  CM
Sbjct: 1316 YTSSPSCM 1323
>NP_001627
          Length = 298

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YTSTVRC 7
           YT TV C
Sbjct: 251 YTGTVDC 257
>NP_001142
          Length = 298

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 1   YTSTVRC 7
           YT TV C
Sbjct: 251 YTGTVDC 257
>NP_055737
          Length = 1429

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   TSTVRCMH 9
           T+T  C+H
Sbjct: 546 TTTTLCLH 553
>NP_001028225
          Length = 1375

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   TSTVRCMH 9
           T+T  C+H
Sbjct: 546 TTTTLCLH 553
>NP_001186438
          Length = 270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  TSTVRCMH 9
          T TVRC +
Sbjct: 35 TLTVRCQY 42
>NP_127497
          Length = 1473

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   TSTVRCMH 9
           T+T  C+H
Sbjct: 546 TTTTLCLH 553
>NP_127500
          Length = 1399

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   TSTVRCMH 9
           T+T  C+H
Sbjct: 546 TTTTLCLH 553
>NP_127499
          Length = 1443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   TSTVRCMH 9
           T+T  C+H
Sbjct: 546 TTTTLCLH 553
>NP_001010919
          Length = 315

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   YTSTVRCM 8
           +TS  RC+
Sbjct: 192 FTSVTRCL 199
>NP_001230133
          Length = 296

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2   TSTVRC 7
           TST RC
Sbjct: 285 TSTTRC 290
>NP_056400
          Length = 1237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 802 YTGKVPCNH 810
>NP_683692
          Length = 3051

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2    TSTVRCM 8
            TST  CM
Sbjct: 2332 TSTAECM 2338
>NP_001263389
          Length = 143

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1  YTSTVRCM 8
          +TS  RC+
Sbjct: 20 FTSVTRCL 27
>NP_060738
          Length = 459

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   YTSTVRCM 8
           + STV+C+
Sbjct: 132 FQSTVKCL 139
>NP_057340
          Length = 515

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   STVRCMH 9
           STV C+H
Sbjct: 319 STVVCVH 325
>NP_001157787
          Length = 1941

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1888 TATIRC 1893
>NP_079466
          Length = 1353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1300 TATIRC 1305
>NP_001186439
          Length = 258

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  TSTVRCMH 9
          T TVRC +
Sbjct: 35 TLTVRCQY 42
>XP_003960344
          Length = 2085

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 2032 TATIRC 2037
>XP_005260753
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 411 YTGKVPCNH 419
>XP_005260752
          Length = 1046

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 611 YTGKVPCNH 619
>XP_005260751
          Length = 1060

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 625 YTGKVPCNH 633
>XP_005260750
          Length = 1180

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 807 YTGKVPCNH 815
>XP_005260749
          Length = 1211

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 776 YTGKVPCNH 784
>XP_005260748
          Length = 1216

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 781 YTGKVPCNH 789
>XP_005260747
          Length = 1217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 782 YTGKVPCNH 790
>XP_005260746
          Length = 1237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 802 YTGKVPCNH 810
>XP_005260745
          Length = 1242

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 5/9 (55%)

Query: 1   YTSTVRCMH 9
           YT  V C H
Sbjct: 807 YTGKVPCNH 815
>XP_006723175
          Length = 1094

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   YTSTVRCM 8
           YTS+  CM
Sbjct: 629 YTSSPSCM 636
>XP_005258729
          Length = 1780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    YTSTVRCM 8
            YTS+  CM
Sbjct: 1316 YTSSPSCM 1323
>XP_005258728
          Length = 1781

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    YTSTVRCM 8
            YTS+  CM
Sbjct: 1316 YTSSPSCM 1323
>XP_005267056
          Length = 315

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 1   YTSTVRCM 8
           +TS  RC+
Sbjct: 192 FTSVTRCL 199
>XP_006714719
          Length = 286

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   YTSTVRCM 8
           + STV+C+
Sbjct: 132 FQSTVKCL 139
>XP_005248609
          Length = 367

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   YTSTVRCM 8
           + STV+C+
Sbjct: 132 FQSTVKCL 139
>XP_005248608
          Length = 401

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   YTSTVRCM 8
           + STV+C+
Sbjct: 132 FQSTVKCL 139
>XP_005248208
          Length = 3097

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2    TSTVRCM 8
            TST  CM
Sbjct: 2332 TSTAECM 2338
>XP_005248207
          Length = 3098

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2    TSTVRCM 8
            TST  CM
Sbjct: 2332 TSTAECM 2338
>XP_006714021
          Length = 3112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 2    TSTVRCM 8
            TST  CM
Sbjct: 2332 TSTAECM 2338
>XP_006712951
          Length = 2119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 2066 TATIRC 2071
>XP_006712732
          Length = 938

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   TSTVRC 7
           T+T+RC
Sbjct: 885 TATIRC 890
>XP_006712731
          Length = 1102

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1049 TATIRC 1054
>XP_006712730
          Length = 1106

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1053 TATIRC 1058
>XP_006712729
          Length = 1121

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1068 TATIRC 1073
>XP_006712728
          Length = 1307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1254 TATIRC 1259
>XP_006712727
          Length = 1319

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1266 TATIRC 1271
>XP_006712726
          Length = 1319

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1266 TATIRC 1271
>XP_006712725
          Length = 1352

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1299 TATIRC 1304
>XP_006712724
          Length = 1353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1300 TATIRC 1305
>XP_005264052
          Length = 1353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1300 TATIRC 1305
>XP_005263995
          Length = 1382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1329 TATIRC 1334
>XP_006712580
          Length = 1382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1329 TATIRC 1334
>XP_005263994
          Length = 1496

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1443 TATIRC 1448
>XP_006712578
          Length = 1914

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1861 TATIRC 1866
>XP_006712577
          Length = 1915

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1862 TATIRC 1867
>XP_006710661
          Length = 4057

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3410 HTATLRC 3416
>XP_005245920
          Length = 4392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3228 HTATLRC 3234
>XP_006710660
          Length = 4397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3227 HTATLRC 3233
>XP_006710659
          Length = 4556

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3386 HTATLRC 3392
>XP_006710658
          Length = 4563

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3393 HTATLRC 3399
>XP_006710657
          Length = 4579

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1    YTSTVRC 7
            +T+T+RC
Sbjct: 3409 HTATLRC 3415
>XP_006710197
          Length = 1836

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2    TSTVRC 7
            T+T+RC
Sbjct: 1783 TATIRC 1788
>NP_004819
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  TSTVRCMH 9
          T TVRC +
Sbjct: 35 TLTVRCQY 42
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.334    0.126    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 524,562
Number of extensions: 1029
Number of successful extensions: 121
Number of sequences better than 10000.0: 121
Number of HSP's gapped: 121
Number of HSP's successfully gapped: 121
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package