Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245202 22 134 NP_001245200 22 134 NP_001161091 22 134 NP_000240 22 134 NP_001161090 22 134 NP_001161089 22 134 NP_001245203 22 134 XP_005265221 22 134 XP_005265220 22 134 NP_009184 18 1935 NP_076433 18 1935 XP_005260095 18 1935 XP_006722913 18 1935 XP_006722912 18 1935 XP_006722911 18 1935 NP_775754 17 2528 NP_001073 17 2528 NP_001122404 17 2528 NP_067010 17 2528 NP_000887 17 2528 NP_001186137 17 2528 XP_005259968 17 2528 XP_006722814 17 2528 NP_001186138 17 2528 NP_066923 17 4312 NP_001185918 17 4312 NP_060918 16 5631 NP_056976 16 7355 NP_001035362 16 7355 NP_001073865 16 7355 NP_055678 16 7355 NP_001257694 16 7355 NP_001257693 16 7355 NP_149991 16 7355 NP_443098 16 7355 XP_005269951 16 7355 XP_005269950 16 7355 XP_005269949 16 7355 XP_005269948 16 7355 XP_006717954 16 7355 NP_001191243 15 9605 NP_000940 15 9605 NP_000383 15 9605 NP_001191245 15 9605 NP_001191246 15 9605 NP_001191244 15 9605 NP_073625 15 9605 NP_795345 15 9605 NP_671766 15 9605 NP_671756 15 9605 NP_055496 15 9605 NP_003734 15 9605 NP_940870 15 9605 XP_006724409 15 9605 XP_005261851 15 9605 XP_005261850 15 9605 XP_005259500 15 9605 XP_006717693 15 9605 XP_005250861 15 9605 XP_006715494 15 9605 XP_006715493 15 9605 XP_006714547 15 9605 XP_005264685 15 9605 XP_005264684 15 9605 XP_005264683 15 9605 XP_005264682 15 9605 NP_620172 15 9605 NP_001138678 15 9605>NP_001245202 Length = 515 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 10 YSVKKCIF 17>NP_001245200 Length = 687 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 251 YSVKKCIF 258>NP_001161091 Length = 515 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 10 YSVKKCIF 17>NP_000240 Length = 756 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 251 YSVKKCIF 258>NP_001161090 Length = 515 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 10 YSVKKCIF 17>NP_001161089 Length = 658 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 153 YSVKKCIF 160>NP_001245203 Length = 515 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 10 YSVKKCIF 17>XP_005265221 Length = 515 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 10 YSVKKCIF 17>XP_005265220 Length = 515 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 YSVKKCIF 8 YSVKKCIF Sbjct: 10 YSVKKCIF 17>NP_009184 Length = 520 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KCIFS Sbjct: 202 SLQKCIFS 209>NP_076433 Length = 524 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KCIFS Sbjct: 202 SLQKCIFS 209>XP_005260095 Length = 334 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KCIFS Sbjct: 12 SLQKCIFS 19>XP_006722913 Length = 375 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KCIFS Sbjct: 53 SLQKCIFS 60>XP_006722912 Length = 375 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KCIFS Sbjct: 53 SLQKCIFS 60>XP_006722911 Length = 411 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KCIFS Sbjct: 202 SLQKCIFS 209>NP_775754 Length = 531 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 210 SLQKCVFS 217>NP_001073 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>NP_001122404 Length = 524 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>NP_067010 Length = 524 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>NP_000887 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>NP_001186137 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>XP_005259968 Length = 371 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 53 SLQKCVFS 60>XP_006722814 Length = 391 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>NP_001186138 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVKKCIFS 9 S++KC+FS Sbjct: 202 SLQKCVFS 209>NP_066923 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YSVKKCI 7 Y+V+KCI Sbjct: 421 YTVEKCI 427>NP_001185918 Length = 406 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YSVKKCI 7 Y+V+KCI Sbjct: 370 YTVEKCI 376>NP_060918 Length = 1230 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YSVKKCI 7 YS+ KC+ Sbjct: 797 YSIAKCV 803>NP_056976 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>NP_001035362 Length = 1762 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS+++C+ S Sbjct: 55 YSLRRCLSS 63>NP_001073865 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YSVKKC 6 YSVK C Sbjct: 295 YSVKSC 300>NP_055678 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>NP_001257694 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>NP_001257693 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>NP_149991 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KKCIFS 9 +KC+FS Sbjct: 291 RKCVFS 296>NP_443098 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS+++C+ S Sbjct: 55 YSLRRCLSS 63>XP_005269951 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>XP_005269950 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>XP_005269949 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>XP_005269948 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>XP_006717954 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 YSVKKCIFS 9 YS++ C+++ Sbjct: 433 YSLRACVYN 441>NP_001191243 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSVKKCIF 8 YS+ CIF Sbjct: 160 YSMVTCIF 167>NP_000940 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSVKKCIF 8 YS+ CIF Sbjct: 261 YSMVTCIF 268>NP_000383 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KKCIFS 9 +KC+FS Sbjct: 1194 QKCVFS 1199>NP_001191245 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSVKKCIF 8 YS+ CIF Sbjct: 261 YSMVTCIF 268>NP_001191246 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSVKKCIF 8 YS+ CIF Sbjct: 261 YSMVTCIF 268>NP_001191244 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSVKKCIF 8 YS+ CIF Sbjct: 261 YSMVTCIF 268>NP_073625 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVKKCIF 8 +VKKC F Sbjct: 171 NVKKCSF 177>NP_795345 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SVKKCIF 8 +VKKC F Sbjct: 171 NVKKCSF 177>NP_671766 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>NP_671756 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>NP_055496 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VKKCIFS 9 V+KCI S Sbjct: 433 VRKCILS 439>NP_003734 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>NP_940870 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 S+KKCI Sbjct: 1064 SLKKCI 1069>XP_006724409 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 SV+KCI Sbjct: 436 SVRKCI 441>XP_005261851 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 SV+KCI Sbjct: 436 SVRKCI 441>XP_005261850 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 SV+KCI Sbjct: 436 SVRKCI 441>XP_005259500 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VKKCIFS 9 V+KCI S Sbjct: 433 VRKCILS 439>XP_006717693 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KKCIFS 9 +KC+FS Sbjct: 962 QKCVFS 967>XP_005250861 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SVKKCIFS 9 ++ KCIF+ Sbjct: 228 TIPKCIFT 235>XP_006715494 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 S+KKCI Sbjct: 838 SLKKCI 843>XP_006715493 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 S+KKCI Sbjct: 1064 SLKKCI 1069>XP_006714547 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSVKKCIF 8 YS+ CIF Sbjct: 261 YSMVTCIF 268>XP_005264685 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>XP_005264684 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>XP_005264683 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>XP_005264682 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKKCIFS 9 V+KCI++ Sbjct: 292 VRKCIYA 298>NP_620172 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SVKKCIFS 9 ++ KCIF+ Sbjct: 237 TIPKCIFT 244>NP_001138678 Length = 1806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SVKKCI 7 SV+KCI Sbjct: 436 SVRKCI 441Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.137 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 616,590 Number of extensions: 842 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |