Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064592 17 2528 NP_065816 17 2528 XP_005252384 17 2528 XP_006710573 17 2528 XP_006710572 17 2528 XP_006710571 17 2528 XP_006710570 17 2528 XP_006710569 17 2528 XP_006710568 17 2528 XP_006710567 17 2528 XP_006710566 17 2528 XP_005245859 17 2528 NP_001165599 16 5631 NP_757366 16 5631 NP_009111 16 5631 NP_776173 16 5631 XP_005276340 16 5631 XP_005254400 16 5631 XP_005254399 16 5631 XP_006719419 16 5631 XP_006719416 16 5631 XP_006719415 16 5631 XP_006719414 16 5631 XP_006719412 16 5631 XP_006719411 16 5631 XP_005277735 16 5631 XP_005249981 16 5631 NP_001810 16 7355 NP_001121113 15 9605 NP_001017402 15 9605 NP_000219 15 9605 NP_065896 15 9605 XP_006719582 15 9605 XP_005253643 15 9605 XP_005253642 15 9605 XP_006719581 15 9605 XP_006719580 15 9605 XP_005253640 15 9605 XP_006719579 15 9605 XP_005253639 15 9605 XP_005273181 15 9605>NP_064592 Length = 1561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YSRKSAQFQ 9 Y RKS +FQ Sbjct: 1343 YKRKSVKFQ 1351>NP_065816 Length = 5183 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3461 YGRKAAQF 3468>XP_005252384 Length = 841 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YSRKSAQFQ 9 Y RKS +FQ Sbjct: 623 YKRKSVKFQ 631>XP_006710573 Length = 5177 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3455 YGRKAAQF 3462>XP_006710572 Length = 5188 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3466 YGRKAAQF 3473>XP_006710571 Length = 5194 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3472 YGRKAAQF 3479>XP_006710570 Length = 5195 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3473 YGRKAAQF 3480>XP_006710569 Length = 5212 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3490 YGRKAAQF 3497>XP_006710568 Length = 5221 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3499 YGRKAAQF 3506>XP_006710567 Length = 5222 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3500 YGRKAAQF 3507>XP_006710566 Length = 5222 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3500 YGRKAAQF 3507>XP_005245859 Length = 5223 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y RK+AQF Sbjct: 3501 YGRKAAQF 3508>NP_001165599 Length = 1331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRKSAQFQ 9 SRKSA+F+ Sbjct: 10 SRKSAKFR 17>NP_757366 Length = 1332 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRKSAQFQ 9 SRKSA+F+ Sbjct: 10 SRKSAKFR 17>NP_009111 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSRKSAQFQ 9 YS+KSA ++ Sbjct: 506 YSQKSAMYE 514>NP_776173 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 677 YSRKSAK 683>XP_005276340 Length = 158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 87 YSRKSAK 93>XP_005254400 Length = 1378 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRKSAQFQ 9 SRKSA+F+ Sbjct: 57 SRKSAKFR 64>XP_005254399 Length = 1379 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRKSAQFQ 9 SRKSA+F+ Sbjct: 57 SRKSAKFR 64>XP_006719419 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 362 YSRKSAK 368>XP_006719416 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 534 YSRKSAK 540>XP_006719415 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 534 YSRKSAK 540>XP_006719414 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 627 YSRKSAK 633>XP_006719412 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 677 YSRKSAK 683>XP_006719411 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 657 YSRKSAK 663>XP_005277735 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSRKSAQFQ 9 YS+KSA ++ Sbjct: 475 YSQKSAMYE 483>XP_005249981 Length = 158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YSRKSAQ 7 YSRKSA+ Sbjct: 87 YSRKSAK 93>NP_001810 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSRKSAQF 8 Y +KSA+F Sbjct: 613 YRKKSAEF 620>NP_001121113 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSRKSAQFQ 9 Y RK QF+ Sbjct: 696 YQRKREQFE 704>NP_001017402 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSRKSAQFQ 9 Y RK QF+ Sbjct: 696 YQRKREQFE 704>NP_000219 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSRKSAQFQ 9 Y RK QF+ Sbjct: 696 YQRKREQFE 704>NP_065896 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719582 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005253643 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 188 SRKMAQF 194>XP_005253642 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719581 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719580 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005253640 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719579 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005253639 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRKSAQF 8 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005273181 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSRKSAQFQ 9 Y RK QF+ Sbjct: 696 YQRKREQFE 704Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.117 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 338,737 Number of extensions: 401 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |