Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 22 134 NP_001075109 20 509 NP_001551 18 1482 NP_001248770 18 1482 XP_005262468 18 1482 NP_001098719 18 1482 NP_001098718 18 1482 NP_079056 18 1482 NP_001116242 16 5631 NP_115911 16 5631 XP_006711641 16 5631 XP_005245604 16 5631 XP_005245603 16 5631 NP_612473 16 5631 NP_078789 16 7355 NP_005087 16 7355 NP_001245198 16 7355 NP_001245184 16 7355 NP_001245187 16 7355 NP_001245186 16 7355 NP_001245185 16 7355 NP_001245188 16 7355 NP_001245196 16 7355 NP_001245189 16 7355 NP_001245190 16 7355 NP_001245195 16 7355 NP_001245180 16 7355 NP_001245197 16 7355 NP_001245179 16 7355 NP_001245194 16 7355 NP_001245183 16 7355 NP_001245191 16 7355 NP_001245199 16 7355 NP_001245193 16 7355 NP_001245178 16 7355 NP_001245182 16 7355 NP_001245181 16 7355 NP_009056 16 7355 NP_001245192 16 7355 NP_001164633 16 7355 NP_067646 16 7355 NP_963893 16 7355 NP_872601 16 7355 NP_872600 16 7355 XP_006724939 16 7355 XP_005262575 16 7355 XP_006724938 16 7355 XP_005262367 16 7355 XP_006724778 16 7355 XP_005262366 16 7355 XP_006713398 16 7355 XP_006713397 16 7355 XP_006713396 16 7355 XP_006711541 16 7355 XP_005245460 16 7355 NP_001444 15 9605 NP_055311 15 9605 NP_659416 15 9605 XP_005262180 15 9605 NP_116558 15 9605>NP_008835 Length = 4128 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YSIVPMTSR 9 YS+VPMTSR Sbjct: 3791 YSVVPMTSR 3799>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YSIVPMTS 8 YS+VPMTS Sbjct: 3791 YSVVPMTS 3798>NP_001551 Length = 427 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YSIVPMTSR 9 ++IVP+TSR Sbjct: 217 FNIVPLTSR 225>NP_001248770 Length = 1006 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SIVPMTSR 9 S++PMTSR Sbjct: 356 SLIPMTSR 363>XP_005262468 Length = 286 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YSIVPMTSR 9 ++IVP+TSR Sbjct: 76 FNIVPLTSR 84>NP_001098719 Length = 948 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SIVPMTSR 9 S++PMTSR Sbjct: 356 SLIPMTSR 363>NP_001098718 Length = 1006 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SIVPMTSR 9 S++PMTSR Sbjct: 356 SLIPMTSR 363>NP_079056 Length = 760 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SIVPMTSR 9 S++PMTSR Sbjct: 110 SLIPMTSR 117>NP_001116242 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP+T R Sbjct: 314 SVVPLTER 321>NP_115911 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP+T R Sbjct: 314 SVVPLTER 321>XP_006711641 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP+T R Sbjct: 314 SVVPLTER 321>XP_005245604 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP+T R Sbjct: 314 SVVPLTER 321>XP_005245603 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP+T R Sbjct: 314 SVVPLTER 321>NP_612473 Length = 119 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S++P TSR Sbjct: 47 SVIPATSR 54>NP_078789 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YSIVPMT 7 YS++P+T Sbjct: 1374 YSLIPIT 1380>NP_005087 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YSIVPM 6 YS++PM Sbjct: 1334 YSVIPM 1339>NP_001245198 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 625 SLVPETSR 632>NP_001245184 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 595 SLVPETSR 602>NP_001245187 Length = 1399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 726 SLVPETSR 733>NP_001245186 Length = 1223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 550 SLVPETSR 557>NP_001245185 Length = 1335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 719 SLVPETSR 726>NP_001245188 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 658 SLVPETSR 665>NP_001245196 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_001245189 Length = 1377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 704 SLVPETSR 711>NP_001245190 Length = 1389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 716 SLVPETSR 723>NP_001245195 Length = 1367 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 719 SLVPETSR 726>NP_001245180 Length = 1363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 690 SLVPETSR 697>NP_001245197 Length = 1263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 595 SLVPETSR 602>NP_001245179 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 534 SLVPETSR 541>NP_001245194 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 591 SLVPETSR 598>NP_001245183 Length = 1211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 595 SLVPETSR 602>NP_001245191 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 647 SLVPETSR 654>NP_001245199 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 550 SLVPETSR 557>NP_001245193 Length = 1376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 703 SLVPETSR 710>NP_001245178 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 771 SLVPETSR 778>NP_001245182 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 690 SLVPETSR 697>NP_001245181 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 719 SLVPETSR 726>NP_009056 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_001245192 Length = 1290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_001164633 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YSIVPM 6 YS++PM Sbjct: 1322 YSVIPM 1327>NP_067646 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSIVPMTSR 9 YS+ PM R Sbjct: 360 YSVAPMNVR 368>NP_963893 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YSIVPM 6 YS++PM Sbjct: 1334 YSVIPM 1339>NP_872601 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 674 SLVPETSR 681>NP_872600 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 674 SLVPETSR 681>XP_006724939 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 674 SLVPETSR 681>XP_005262575 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 719 SLVPETSR 726>XP_006724938 Length = 1234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S+VP TSR Sbjct: 771 SLVPETSR 778>XP_005262367 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YSIVPM 6 YS++PM Sbjct: 1322 YSVIPM 1327>XP_006724778 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YSIVPM 6 YS++PM Sbjct: 1334 YSVIPM 1339>XP_005262366 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YSIVPM 6 YS++PM Sbjct: 1334 YSVIPM 1339>XP_006713398 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YSIVPMT 7 YS++P+T Sbjct: 1374 YSLIPIT 1380>XP_006713397 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YSIVPMT 7 YS++P+T Sbjct: 1374 YSLIPIT 1380>XP_006713396 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YSIVPMT 7 YS++P+T Sbjct: 1374 YSLIPIT 1380>XP_006711541 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSIVPMTSR 9 YS+ PM R Sbjct: 398 YSVAPMNVR 406>XP_005245460 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSIVPMTSR 9 YS+ PM R Sbjct: 398 YSVAPMNVR 406>NP_001444 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSIVPMTS 8 YS+ P+TS Sbjct: 431 YSLPPVTS 438>NP_055311 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSIVPMTS 8 Y I P+TS Sbjct: 399 YKITPITS 406>NP_659416 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIVPMTSR 9 S++P TSR Sbjct: 492 SVLPYTSR 499>XP_005262180 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSIVPMTS 8 Y I P+TS Sbjct: 278 YKITPITS 285>NP_116558 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IVPMTSR 9 ++P+TSR Sbjct: 127 VIPVTSR 133Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.128 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 505,473 Number of extensions: 839 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |