Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_899243 17 2528 NP_001139283 17 2528 NP_201583 17 2528 NP_059978 17 2528 NP_001139291 17 2528 NP_001135918 17 2528 NP_065208 17 2528 XP_006720135 17 2528 XP_006720134 17 2528 XP_006720133 17 2528 XP_005273533 17 2528 NP_065210 17 2528 NP_065209 17 2528 NP_000028 17 2528 NP_001141 17 3301 XP_005254949 17 3301 NP_001104777 17 4312 NP_001138471 17 4312 NP_002201 17 4312 NP_001138472 17 4312 XP_006712576 17 4312 XP_005246593 17 4312 NP_114160 16 5631 NP_775871 16 5631 NP_079083 16 5631 XP_006720513 16 5631 XP_005254003 16 5631 XP_005254002 16 5631 NP_071881 16 7355 NP_997244 16 7355 NP_002282 16 7355 NP_001275891 16 7355 NP_004231 16 7355 NP_000661 16 7355 XP_006712137 16 7355 XP_005264538 16 7355 XP_005264537 16 7355 XP_006712136 16 7355 NP_005737 15 9605 NP_001273057 15 9605 NP_061120 15 9605 NP_001273055 15 9605 NP_001273053 15 9605 NP_055554 15 9605 NP_036610 15 9605 NP_001070909 15 9605 XP_005250157 15 9605 XP_005267296 15 9605 XP_005267293 15 9605 XP_006714185 15 9605 XP_006711390 15 9605 XP_006711389 15 9605 XP_005273191 15 9605 NP_001116 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSFKGTSTG 9 YSFK TSTG Sbjct: 3540 YSFKDTSTG 3548>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSFKGTSTG 9 YSFK TSTG Sbjct: 3540 YSFKDTSTG 3548>NP_899243 Length = 1977 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFKGTSTG 9 +F GTSTG Sbjct: 878 AFSGTSTG 885>NP_001139283 Length = 801 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSFKGTST 8 YSF+ TST Sbjct: 90 YSFRNTST 97>NP_201583 Length = 808 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSFKGTST 8 YSF+ TST Sbjct: 90 YSFRNTST 97>NP_059978 Length = 804 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSFKGTST 8 YSF+ TST Sbjct: 93 YSFRNTST 100>NP_001139291 Length = 841 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSFKGTST 8 YSF+ TST Sbjct: 103 YSFRNTST 110>NP_001135918 Length = 1897 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YSFKGTST 8 +SF+GTST Sbjct: 1771 HSFQGTST 1778>NP_065208 Length = 1856 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YSFKGTST 8 +SF+GTST Sbjct: 1730 HSFQGTST 1737>XP_006720135 Length = 1454 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFKGTSTG 9 +F GTSTG Sbjct: 878 AFSGTSTG 885>XP_006720134 Length = 1579 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFKGTSTG 9 +F GTSTG Sbjct: 878 AFSGTSTG 885>XP_006720133 Length = 1969 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFKGTSTG 9 +F GTSTG Sbjct: 878 AFSGTSTG 885>XP_005273533 Length = 1921 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YSFKGTST 8 +SF+GTST Sbjct: 1771 HSFQGTST 1778>NP_065210 Length = 1719 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YSFKGTST 8 +SF+GTST Sbjct: 1568 HSFQGTST 1575>NP_065209 Length = 1881 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YSFKGTST 8 +SF+GTST Sbjct: 1730 HSFQGTST 1737>NP_000028 Length = 1880 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YSFKGTST 8 +SF+GTST Sbjct: 1730 HSFQGTST 1737>NP_001141 Length = 967 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSFKGTST 8 Y FKG+ST Sbjct: 101 YVFKGSST 108>XP_005254949 Length = 967 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YSFKGTST 8 Y FKG+ST Sbjct: 101 YVFKGSST 108>NP_001104777 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFKGTSTG 9 SF GT TG Sbjct: 89 SFHGTGTG 96>NP_001138471 Length = 1002 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 Y F G STG Sbjct: 358 YIFNGRSTG 366>NP_002201 Length = 1048 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 Y F G STG Sbjct: 404 YIFNGRSTG 412>NP_001138472 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 Y F G STG Sbjct: 368 YIFNGRSTG 376>XP_006712576 Length = 901 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 Y F G STG Sbjct: 257 YIFNGRSTG 265>XP_005246593 Length = 1047 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 Y F G STG Sbjct: 403 YIFNGRSTG 411>NP_114160 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SFKGTS 7 SFKGTS Sbjct: 23 SFKGTS 28>NP_775871 Length = 8384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YSFKGTSTG 9 +S GTSTG Sbjct: 2020 WSSSGTSTG 2028Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SFKGTST 8 SF+GT T Sbjct: 7894 SFRGTGT 7900>NP_079083 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YSFKGTST 8 YSF TST Sbjct: 190 YSFTATST 197>XP_006720513 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YSFKGTS 7 Y+FKG+S Sbjct: 368 YTFKGSS 374>XP_005254003 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SFKGTS 7 SFKGTS Sbjct: 23 SFKGTS 28>XP_005254002 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SFKGTS 7 SFKGTS Sbjct: 31 SFKGTS 36>NP_071881 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 YS G STG Sbjct: 188 YSLGGISTG 196>NP_997244 Length = 3169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSFKGTSTG 9 Y+ +GT+TG Sbjct: 1919 YTQQGTATG 1927>NP_002282 Length = 1786 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SFKGTSTG 9 SF G STG Sbjct: 173 SFPGISTG 180>NP_001275891 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSFKGTSTG 9 Y F+G+S G Sbjct: 549 YHFEGSSEG 557>NP_004231 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSFKGTSTG 9 Y F+G+S G Sbjct: 493 YHFEGSSEG 501>NP_000661 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YSFKGTST 8 Y F GTST Sbjct: 144 YHFFGTST 151>XP_006712137 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 YS G STG Sbjct: 188 YSLGGISTG 196>XP_005264538 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 YS G STG Sbjct: 188 YSLGGISTG 196>XP_005264537 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 YS G STG Sbjct: 188 YSLGGISTG 196>XP_006712136 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YSFKGTSTG 9 YS G STG Sbjct: 188 YSLGGISTG 196>NP_005737 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SFKGTST 8 +FKGT T Sbjct: 214 NFKGTDT 220>NP_001273057 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 624 RGTSTG 629>NP_061120 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 646 RGTSTG 651>NP_001273055 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 646 RGTSTG 651>NP_001273053 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 647 RGTSTG 652>NP_055554 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKGTSTG 9 F GT+TG Sbjct: 812 FAGTNTG 818>NP_036610 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SFKGTSTG 9 +FKGT G Sbjct: 41 AFKGTKKG 48>NP_001070909 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKGTSTG 9 F GT+TG Sbjct: 639 FAGTNTG 645>XP_005250157 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SFKGTST 8 +FKGT T Sbjct: 214 NFKGTDT 220>XP_005267296 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKGTSTG 9 F GT+TG Sbjct: 201 FAGTNTG 207>XP_005267293 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKGTSTG 9 F GT+TG Sbjct: 810 FAGTNTG 816>XP_006714185 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SFKGTSTG 9 SF+G TG Sbjct: 483 SFRGRQTG 490>XP_006711390 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 483 RGTSTG 488>XP_006711389 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 559 RGTSTG 564>XP_005273191 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KGTSTG 9 +GTSTG Sbjct: 647 RGTSTG 652>NP_001116 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YSFKGTS 7 Y FKG S Sbjct: 318 YGFKGVS 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.126 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 626,591 Number of extensions: 1164 Number of successful extensions: 57 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |