Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 509 NP_001035957 20 509 XP_006721990 20 509 XP_006721989 20 509 XP_005258041 20 509 XP_006721988 20 509 XP_006721987 20 509 XP_006721986 20 509 XP_005258040 20 509 XP_006721985 20 509 NP_001129513 17 2528 XP_006713401 17 2528 XP_005265549 17 2528 XP_005265548 17 2528 NP_079103 17 2528 NP_775832 17 3301 NP_001393 17 4312 NP_001139008 17 4312 NP_056487 16 5631 NP_001136245 15 9605 NP_001136239 15 9605 NP_001136236 15 9605 NP_001136244 15 9605 NP_001136238 15 9605 NP_001136240 15 9605 NP_001136243 15 9605 NP_001136242 15 9605 NP_001136235 15 9605 NP_001136237 15 9605 NP_001136241 15 9605 NP_149045 15 9605 NP_001254708 15 9605 NP_612146 15 9605 NP_001180481 15 9605 NP_001258975 15 9605 NP_848613 15 9605 NP_060072 15 9605 XP_005278099 15 9605 XP_006724600 15 9605 XP_005278096 15 9605 XP_006723248 15 9605 XP_005258914 15 9605 XP_005258915 15 9605 XP_005256671 15 9605 XP_006718013 15 9605>NP_000258 Length = 2818 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2310 YSAGTALLE 2318>NP_001035957 Length = 2839 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2331 YSAGTALLE 2339>XP_006721990 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2341 YSAGTALLE 2349>XP_006721989 Length = 2823 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2341 YSAGTALLE 2349>XP_005258041 Length = 2836 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2310 YSAGTALLE 2318>XP_006721988 Length = 2846 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2320 YSAGTALLE 2328>XP_006721987 Length = 2849 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2341 YSAGTALLE 2349>XP_006721986 Length = 2854 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2328 YSAGTALLE 2336>XP_005258040 Length = 2857 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2331 YSAGTALLE 2339>XP_006721985 Length = 2867 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YSAGT LLE Sbjct: 2341 YSAGTALLE 2349>NP_001129513 Length = 296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 Y+AGT +LE Sbjct: 205 YNAGTDILE 213>XP_006713401 Length = 268 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 Y+AGT +LE Sbjct: 177 YNAGTDILE 185>XP_005265549 Length = 268 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 Y+AGT +LE Sbjct: 177 YNAGTDILE 185>XP_005265548 Length = 319 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 Y+AGT +LE Sbjct: 228 YNAGTDILE 236>NP_079103 Length = 347 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 Y+AGT +LE Sbjct: 256 YNAGTDILE 264>NP_775832 Length = 518 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAGTTLLE 9 YS+ TTLL+ Sbjct: 194 YSSNTTLLD 202>NP_001393 Length = 462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SAGTTLLE 9 ++GTTLLE Sbjct: 223 ASGTTLLE 230>NP_001139008 Length = 190 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SAGTTLLE 9 S GTTLLE Sbjct: 85 SFGTTLLE 92>NP_056487 Length = 1639 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SAGTTLLE 9 +AG+TLLE Sbjct: 1142 TAGSTLLE 1149>NP_001136245 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 812 AGTTILQ 818>NP_001136239 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 797 AGTTILQ 803>NP_001136236 Length = 1957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136244 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136238 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136240 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 812 AGTTILQ 818>NP_001136243 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 839 AGTTILQ 845>NP_001136242 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001136235 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 839 AGTTILQ 845>NP_001136237 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 763 AGTTILQ 769>NP_001136241 Length = 1790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 846 AGTTILQ 852>NP_149045 Length = 1955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 834 AGTTILQ 840>NP_001254708 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YSAGTTLLE 9 ++AG+TL++ Sbjct: 398 FTAGSTLIQ 406>NP_612146 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAGTTLL 8 S GTTLL Sbjct: 301 SGGTTLL 307>NP_001180481 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YSAGTTLLE 9 ++AG+TL++ Sbjct: 430 FTAGSTLIQ 438>NP_001258975 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SAGTTL 7 SAGTTL Sbjct: 351 SAGTTL 356>NP_848613 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YSAGTTLL 8 Y AG TLL Sbjct: 115 YDAGFTLL 122>NP_060072 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSAGTTLLE 9 YS GT+ +E Sbjct: 301 YSTGTSAVE 309>XP_005278099 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSAGTTLLE 9 YS GT+ +E Sbjct: 84 YSTGTSAVE 92>XP_006724600 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSAGTTLLE 9 YS GT+ +E Sbjct: 301 YSTGTSAVE 309>XP_005278096 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YSAGTTLLE 9 YS GT+ +E Sbjct: 301 YSTGTSAVE 309>XP_006723248 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YSAGTTLLE 9 ++AG+TL++ Sbjct: 400 FTAGSTLIQ 408>XP_005258914 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YSAGTTLLE 9 ++AG+TL++ Sbjct: 432 FTAGSTLIQ 440>XP_005258915 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YSAGTTLLE 9 ++AG+TL++ Sbjct: 432 FTAGSTLIQ 440>XP_005256671 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YSAGTTLL 8 Y AG TLL Sbjct: 115 YDAGFTLL 122>XP_006718013 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AGTTLLE 9 AGTT+L+ Sbjct: 834 AGTTILQ 840Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.123 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 508,468 Number of extensions: 687 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |