Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_061720 18 1482 NP_004403 17 2528 XP_005252433 17 2528 XP_005252432 17 2528 XP_005252430 17 2528 XP_006717451 17 2528 NP_005449 16 5631 XP_005252373 16 5631 XP_006711056 16 7355 NP_008914 16 7355 NP_570853 15 9605 NP_570854 15 9605 NP_000453 15 9605 NP_055873 15 9605 NP_001009814 15 9605 XP_005268328 15 9605 XP_006720739 15 9605 XP_005268327 15 9605 XP_005268326 15 9605 XP_005268324 15 9605 XP_005268325 15 9605 XP_006720738 15 9605 XP_006720737 15 9605 XP_006720736 15 9605 XP_006719855 15 9605 XP_006719854 15 9605 XP_006719853 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YRIIANALN 9 YRIIANAL+ Sbjct: 3334 YRIIANALS 3342>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YRIIANALN 9 YRIIANAL+ Sbjct: 3334 YRIIANALS 3342>NP_061720 Length = 4024 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YRIIANALN 9 YR++A ALN Sbjct: 1619 YRVLAGALN 1627>NP_004403 Length = 391 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRIIANALN 9 YR++ N+LN Sbjct: 370 YRLLGNSLN 378>XP_005252433 Length = 320 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRIIANALN 9 YR++ N+LN Sbjct: 299 YRLLGNSLN 307>XP_005252432 Length = 345 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRIIANALN 9 YR++ N+LN Sbjct: 324 YRLLGNSLN 332>XP_005252430 Length = 363 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRIIANALN 9 YR++ N+LN Sbjct: 342 YRLLGNSLN 350>XP_006717451 Length = 384 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YRIIANALN 9 YR++ N+LN Sbjct: 363 YRLLGNSLN 371>NP_005449 Length = 941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RII NA+N Sbjct: 397 RIILNAMN 404>XP_005252373 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RII NA+N Sbjct: 139 RIILNAMN 146>XP_006711056 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IIANALN 9 IIANA+N Sbjct: 357 IIANAVN 363>NP_008914 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IIANALN 9 IIANA+N Sbjct: 358 IIANAVN 364>NP_570853 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>NP_570854 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 346 YKVISNEFN 354>NP_000453 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 349 YKVISNEFN 357>NP_055873 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RI+AN+ N Sbjct: 876 RIVANSAN 883>NP_001009814 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RI+AN+ N Sbjct: 876 RIVANSAN 883>XP_005268328 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_006720739 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_005268327 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_005268326 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_005268324 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_005268325 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_006720738 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 326 YKVISNEFN 334>XP_006720737 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 346 YKVISNEFN 354>XP_006720736 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YRIIANALN 9 Y++I+N N Sbjct: 346 YKVISNEFN 354>XP_006719855 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RI+AN+ N Sbjct: 876 RIVANSAN 883>XP_006719854 Length = 1550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RI+AN+ N Sbjct: 521 RIVANSAN 528>XP_006719853 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RIIANALN 9 RI+AN+ N Sbjct: 780 RIVANSAN 787Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.141 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 262,315 Number of extensions: 450 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |