Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055726 19 869 NP_055845 17 2528 XP_005248150 17 2528 XP_005248148 17 2528 XP_005248147 17 2528 XP_005248146 17 2528 XP_005248145 17 2528 XP_005248144 17 2528 XP_005248143 17 2528 XP_005248142 17 2528 XP_005248141 17 2528 XP_005248140 17 2528 XP_005248139 17 2528 NP_001245308 17 3301 NP_003606 17 3301 NP_001245309 17 3301 XP_005265658 17 3301 XP_005265657 17 3301 XP_005265656 17 3301 XP_005265655 17 3301 XP_006713484 17 3301 NP_006013 16 5631 NP_001265546 16 5631 NP_001265545 16 5631 NP_004327 16 5631 NP_060063 16 5631 NP_942595 16 5631 XP_005263174 16 5631 NP_002435 16 7355 NP_078858 16 7355 NP_001278232 16 7355 NP_001278214 16 7355 NP_079199 16 7355 NP_078904 16 7355 NP_001182412 16 7355 XP_005262326 16 7355 XP_005268801 16 7355 XP_005268800 16 7355 XP_005268799 16 7355 XP_005250261 16 7355 NP_690852 16 7355 NP_056090 16 7355 NP_061893 15 9605 NP_008970 15 9605 NP_001258773 15 9605 NP_001258774 15 9605 XP_005257107 15 9605 XP_006721757 15 9605 XP_005257106 15 9605 XP_005267344 15 9605>NP_055726 Length = 961 Score = 18.9 bits (37), Expect = 869 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 YQVSYFS 7 YQVSYFS Sbjct: 305 YQVSYFS 311>NP_055845 Length = 3013 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1264 YSVSYYQLS 1272>XP_005248150 Length = 2044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 295 YSVSYYQLS 303>XP_005248148 Length = 3028 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1279 YSVSYYQLS 1287>XP_005248147 Length = 3028 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1279 YSVSYYQLS 1287>XP_005248146 Length = 3073 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1371 YSVSYYQLS 1379>XP_005248145 Length = 3079 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1330 YSVSYYQLS 1338>XP_005248144 Length = 3099 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1356 YSVSYYQLS 1364>XP_005248143 Length = 3105 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1356 YSVSYYQLS 1364>XP_005248142 Length = 3114 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1371 YSVSYYQLS 1379>XP_005248141 Length = 3119 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1371 YSVSYYQLS 1379>XP_005248140 Length = 3119 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1370 YSVSYYQLS 1378>XP_005248139 Length = 3120 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 Y VSY+ LS Sbjct: 1371 YSVSYYQLS 1379>NP_001245308 Length = 1131 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 566 YQLSYLSL 573>NP_003606 Length = 1214 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 685 YQLSYLSL 692>NP_001245309 Length = 1090 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 561 YQLSYLSL 568>XP_005265658 Length = 1095 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 566 YQLSYLSL 573>XP_005265657 Length = 1113 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 548 YQLSYLSL 555>XP_005265656 Length = 1118 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 553 YQLSYLSL 560>XP_005265655 Length = 1126 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 561 YQLSYLSL 568>XP_006713484 Length = 1255 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQ+SY SL Sbjct: 690 YQLSYLSL 697>NP_006013 Length = 144 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQVSYFSLS 9 YQ+ +FS+S Sbjct: 16 YQLRHFSIS 24>NP_001265546 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 YQ+ YF ++ Sbjct: 927 YQIDYFGVA 935>NP_001265545 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 YQ+ YF ++ Sbjct: 964 YQIDYFGVA 972>NP_004327 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YQVSYFSLS 9 YQ+ YF ++ Sbjct: 984 YQIDYFGVA 992>NP_060063 Length = 662 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YQVSYFS 7 +QVSYF+ Sbjct: 309 FQVSYFA 315>NP_942595 Length = 1161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YQVSYFS 7 +QVSYF+ Sbjct: 309 FQVSYFA 315>XP_005263174 Length = 1124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YQVSYFS 7 +QVSYF+ Sbjct: 309 FQVSYFA 315>NP_002435 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 Y V+YFS+ Sbjct: 201 YGVNYFSI 208>NP_078858 Length = 4981 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SYFSLS 9 SYFSLS Sbjct: 3556 SYFSLS 3561>NP_001278232 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SYFSLS 9 SYFSLS Sbjct: 3558 SYFSLS 3563>NP_001278214 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SYFSLS 9 SYFSLS Sbjct: 3558 SYFSLS 3563>NP_079199 Length = 1887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 YQV +F+L Sbjct: 1807 YQVMFFTL 1814>NP_078904 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SYFSLS 9 SYFSLS Sbjct: 401 SYFSLS 406>NP_001182412 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SYFSLS 9 SYFSLS Sbjct: 401 SYFSLS 406>XP_005262326 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQVSYFSL 8 Y V+YFS+ Sbjct: 202 YGVNYFSI 209>XP_005268801 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQVSYFSLS 9 +++ YFSLS Sbjct: 932 FELLYFSLS 940>XP_005268800 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQVSYFSLS 9 +++ YFSLS Sbjct: 933 FELLYFSLS 941>XP_005268799 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQVSYFSLS 9 +++ YFSLS Sbjct: 1121 FELLYFSLS 1129>XP_005250261 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVSYFSLS 9 +++YFSLS Sbjct: 401 ELAYFSLS 408>NP_690852 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QVSYFSLS 9 +++YFSLS Sbjct: 553 ELAYFSLS 560>NP_056090 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQVSYFSLS 9 +++ YFSLS Sbjct: 1120 FELLYFSLS 1128>NP_061893 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YQVSYFSL 8 YQ YF L Sbjct: 635 YQTDYFHL 642>NP_008970 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QVSYFSL 8 +V+YFSL Sbjct: 60 EVTYFSL 66>NP_001258773 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YQVSYFSL 8 YQ YF L Sbjct: 260 YQTDYFHL 267>NP_001258774 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YQVSYFSL 8 YQ YF L Sbjct: 273 YQTDYFHL 280>XP_005257107 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YQVSYFSL 8 YQ YF L Sbjct: 634 YQTDYFHL 641>XP_006721757 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YQVSYFSL 8 YQ YF L Sbjct: 635 YQTDYFHL 642>XP_005257106 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YQVSYFSL 8 YQ YF L Sbjct: 635 YQTDYFHL 642>XP_005267344 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QVSYFSL 8 +V+YFSL Sbjct: 60 EVTYFSL 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.129 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,033 Number of extensions: 530 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |