Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 19 869 NP_001087241 19 869 XP_005265799 19 869 XP_005265798 19 869 XP_005265797 19 869 NP_060918 17 2528 NP_005086 17 3301 XP_005271388 17 3301 XP_006711098 17 3301 XP_006711097 17 3301 XP_005271387 17 3301 XP_005271385 17 3301 NP_008832 17 4312 NP_009098 17 4312 XP_005254461 17 4312 XP_006720603 17 4312 XP_006720602 17 4312 NP_065858 16 5631 XP_005256126 16 5631 NP_004645 16 7355 NP_001034680 16 7355 NP_001034679 16 7355 NP_003836 16 7355 NP_653267 16 7355 NP_001258867 16 7355 NP_689835 16 7355 NP_001401 16 7355 XP_005272733 16 7355 XP_005272732 16 7355 XP_006718373 16 7355 XP_006718372 16 7355 XP_005253186 16 7355 XP_006718371 16 7355 XP_005253185 16 7355 XP_005248505 16 7355 NP_037381 16 7355 NP_001796 15 9605 NP_055928 15 9605 NP_001269109 15 9605 NP_001020016 15 9605 NP_964012 15 9605 NP_008865 15 9605 NP_001248309 15 9605 NP_006237 15 9605 NP_001269111 15 9605 NP_001269110 15 9605 NP_001269108 15 9605 NP_115515 15 9605 NP_071926 15 9605 XP_005259367 15 9605 XP_006723476 15 9605 XP_006723475 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_006714856 15 9605 XP_005268556 15 9605 XP_006714855 15 9605 XP_006714854 15 9605 XP_005268555 15 9605 XP_005268554 15 9605 XP_006710903 15 9605 NP_001129386 15 9605>NP_000213 Length = 976 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YQVAKCMAF 9 YQVAK MAF Sbjct: 774 YQVAKGMAF 782>NP_001087241 Length = 972 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YQVAKCMAF 9 YQVAK MAF Sbjct: 770 YQVAKGMAF 778>XP_005265799 Length = 973 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YQVAKCMAF 9 YQVAK MAF Sbjct: 771 YQVAKGMAF 779>XP_005265798 Length = 976 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YQVAKCMAF 9 YQVAK MAF Sbjct: 774 YQVAKGMAF 782>XP_005265797 Length = 977 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YQVAKCMAF 9 YQVAK MAF Sbjct: 775 YQVAKGMAF 783>NP_060918 Length = 1230 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 Y +AKC+A Sbjct: 797 YSIAKCVA 804>NP_005086 Length = 1548 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 YQ+AKC A Sbjct: 811 YQMAKCDA 818>XP_005271388 Length = 1224 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 YQ+AKC A Sbjct: 487 YQMAKCDA 494>XP_006711098 Length = 1516 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 YQ+AKC A Sbjct: 779 YQMAKCDA 786>XP_006711097 Length = 1542 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 YQ+AKC A Sbjct: 805 YQMAKCDA 812>XP_005271387 Length = 1545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 YQ+AKC A Sbjct: 808 YQMAKCDA 815>XP_005271385 Length = 1551 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YQVAKCMA 8 YQ+AKC A Sbjct: 814 YQMAKCDA 821>NP_008832 Length = 2548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 YQV K M F Sbjct: 994 YQVGKTMVF 1002>NP_009098 Length = 1325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YQVAKC 6 YQ+AKC Sbjct: 554 YQMAKC 559>XP_005254461 Length = 2600 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 YQV K M F Sbjct: 975 YQVGKTMVF 983>XP_006720603 Length = 2619 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 YQV K M F Sbjct: 994 YQVGKTMVF 1002>XP_006720602 Length = 2619 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 YQV K M F Sbjct: 994 YQVGKTMVF 1002>NP_065858 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YQVAKCM 7 YQVA C+ Sbjct: 575 YQVAACL 581>XP_005256126 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YQVAKCM 7 YQVA C+ Sbjct: 575 YQVAACL 581>NP_004645 Length = 2555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YQVAKCM 7 YQ KCM Sbjct: 2386 YQCIKCM 2392>NP_001034680 Length = 2554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YQVAKCM 7 YQ KCM Sbjct: 2385 YQCIKCM 2391>NP_001034679 Length = 2570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YQVAKCM 7 YQ KCM Sbjct: 2385 YQCIKCM 2391>NP_003836 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QVAKCM 7 QVAKC+ Sbjct: 117 QVAKCL 122>NP_653267 Length = 4753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 KCMAF 9 KCMAF Sbjct: 1036 KCMAF 1040>NP_001258867 Length = 2845 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 2422 YQCAKC 2427>NP_689835 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VAKCMAF 9 VA+C+AF Sbjct: 313 VAECVAF 319>NP_001401 Length = 2778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 2355 YQCAKC 2360>XP_005272733 Length = 2559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YQVAKCM 7 YQ KCM Sbjct: 2390 YQCIKCM 2396>XP_005272732 Length = 2575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YQVAKCM 7 YQ KCM Sbjct: 2390 YQCIKCM 2396>XP_006718373 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 478 YQCAKC 483>XP_006718372 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 540 YQCAKC 545>XP_005253186 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 540 YQCAKC 545>XP_006718371 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 554 YQCAKC 559>XP_005253185 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 554 YQCAKC 559>XP_005248505 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VAKCMAF 9 VA+C+AF Sbjct: 314 VAECVAF 320>NP_037381 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQ AKC Sbjct: 554 YQCAKC 559>NP_001796 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQVAKC 6 YQVA C Sbjct: 143 YQVAHC 148>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VAKCMAF 9 VAKC A+ Sbjct: 249 VAKCYAY 255>NP_001269109 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 QVAKCMA 8 Q+AKC++ Sbjct: 347 QIAKCVS 353>NP_001020016 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 Y V C+AF Sbjct: 123 YNVVICIAF 131>NP_964012 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 Y V C+AF Sbjct: 196 YNVVICIAF 204>NP_008865 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 Y V C+AF Sbjct: 142 YNVVICIAF 150>NP_001248309 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 Y V C+AF Sbjct: 127 YNVVICIAF 135>NP_006237 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 QVAKCMA 8 Q+AKC++ Sbjct: 347 QIAKCVS 353>NP_001269111 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 QVAKCMA 8 Q+AKC++ Sbjct: 271 QIAKCVS 277>NP_001269110 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 QVAKCMA 8 Q+AKC++ Sbjct: 271 QIAKCVS 277>NP_001269108 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 QVAKCMA 8 Q+AKC++ Sbjct: 347 QIAKCVS 353>NP_115515 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YQVAKCM 7 +QV KC+ Sbjct: 790 FQVVKCL 796>NP_071926 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 1039 YRVQKCAA 1046>XP_005259367 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YQVAKCM 7 +QV KC+ Sbjct: 594 FQVVKCL 600>XP_006723476 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YQVAKCM 7 +QV KC+ Sbjct: 790 FQVVKCL 796>XP_006723475 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YQVAKCM 7 +QV KC+ Sbjct: 790 FQVVKCL 796>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VAKCMAF 9 VAKC A+ Sbjct: 249 VAKCYAY 255>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VAKCMAF 9 VAKC A+ Sbjct: 249 VAKCYAY 255>XP_006714856 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 841 YRVQKCAA 848>XP_005268556 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 961 YRVQKCAA 968>XP_006714855 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 968 YRVQKCAA 975>XP_006714854 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 981 YRVQKCAA 988>XP_005268555 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 1019 YRVQKCAA 1026>XP_005268554 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQVAKCMA 8 Y+V KC A Sbjct: 1039 YRVQKCAA 1046>XP_006710903 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQVAKCMAF 9 Y V C+AF Sbjct: 196 YNVVICIAF 204>NP_001129386 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AKCMAF 9 A CMAF Sbjct: 1148 ASCMAF 1153Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.135 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 502,896 Number of extensions: 761 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |