Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000334 19 869 NP_001243243 19 869 NP_002430 19 869 NP_003032 18 1135 XP_006721136 18 1135 XP_006721135 18 1135 NP_001398 17 2528 NP_001032 17 3301 NP_002564 17 3301 NP_001139412 17 3301 NP_001139411 17 3301 NP_002554 17 4312 NP_055061 17 4312 XP_006724446 17 4312 NP_859070 16 5631 XP_005245884 16 5631 XP_005245882 16 5631 XP_006710614 16 5631 XP_005245881 16 5631 XP_005245880 16 5631 XP_006710613 16 5631 XP_005245879 16 5631 NP_001001991 16 7355 NP_001269605 16 7355 NP_056245 16 7355 NP_001269604 16 7355 NP_001036065 16 7355 NP_009112 16 7355 XP_006723056 16 7355 NP_957719 15 9605 NP_061004 15 9605 NP_003863 15 9605 NP_958436 15 9605 NP_957718 15 9605 NP_079095 15 9605 NP_001275584 15 9605 NP_001275583 15 9605 NP_001122103 15 9605 NP_689997 15 9605 NP_001008781 15 9605 NP_060009 15 9605 NP_078928 15 9605 NP_002842 15 9605 NP_001193767 15 9605 XP_005257745 15 9605 XP_006722156 15 9605 XP_006722155 15 9605 XP_006722154 15 9605 XP_006721125 15 9605 XP_005255036 15 9605 XP_006718827 15 9605 XP_006716139 15 9605 XP_005250576 15 9605 XP_005246991 15 9605 XP_005246990 15 9605 NP_001193768 15 9605 NP_149059 15 9605>NP_000334 Length = 664 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 Y ITGG+AA Sbjct: 191 YTITGGLAA 199>NP_001243243 Length = 537 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 Y ITGG+AA Sbjct: 64 YTITGGLAA 72>NP_002430 Length = 1137 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 YQIT GIAA Sbjct: 1057 YQITRGIAA 1065>NP_003032 Length = 672 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 Y +TGG+AA Sbjct: 188 YTVTGGLAA 196>XP_006721136 Length = 425 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 Y +TGG+AA Sbjct: 176 YTVTGGLAA 184>XP_006721135 Length = 698 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 Y +TGG+AA Sbjct: 188 YTVTGGLAA 196>NP_001398 Length = 3312 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YQITGG 6 YQITGG Sbjct: 791 YQITGG 796>NP_001032 Length = 1827 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YQITGGI 7 Y++TGGI Sbjct: 314 YRVTGGI 320>NP_002564 Length = 231 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QITGGIAA 9 Q+TGGI A Sbjct: 112 QVTGGIKA 119>NP_001139412 Length = 231 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QITGGIAA 9 Q+TGGI A Sbjct: 112 QVTGGIKA 119>NP_001139411 Length = 231 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QITGGIAA 9 Q+TGGI A Sbjct: 112 QVTGGIKA 119>NP_002554 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQITGGIAA 9 YQ+T G+A+ Sbjct: 306 YQVTRGLAS 314>NP_055061 Length = 3014 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YQITGG 6 YQ+TGG Sbjct: 722 YQLTGG 727>XP_006724446 Length = 3019 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YQITGG 6 YQ+TGG Sbjct: 722 YQLTGG 727>NP_859070 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245884 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245882 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_006710614 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245881 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245880 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_006710613 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245879 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGG+AA Sbjct: 206 VTGGLAA 212>NP_001001991 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGGIAA 9 TGGIAA Sbjct: 665 TGGIAA 670>NP_001269605 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGGIAA 9 TGGIAA Sbjct: 554 TGGIAA 559>NP_056245 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGGIAA 9 TGGIAA Sbjct: 682 TGGIAA 687>NP_001269604 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TGGIAA 9 TGGIAA Sbjct: 625 TGGIAA 630>NP_001036065 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQITGGIA 8 YQ+TG ++ Sbjct: 103 YQVTGSLS 110>NP_009112 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQITGGIA 8 YQ+TG ++ Sbjct: 103 YQVTGSLS 110>XP_006723056 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQITGGIA 8 YQ+TG ++ Sbjct: 103 YQVTGSLS 110>NP_957719 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>NP_061004 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>NP_003863 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>NP_958436 Length = 909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>NP_957718 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>NP_079095 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_001275584 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_001275583 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_001122103 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_689997 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YQITGGIAA 9 YQI GG A Sbjct: 668 YQILGGRTA 676>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 Y ITGG Sbjct: 2962 YHITGG 2967>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQITGGIA 8 + +TGGIA Sbjct: 3395 FLLTGGIA 3402>NP_078928 Length = 2015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQITGGIA 8 YQI G+A Sbjct: 1368 YQIASGLA 1375>NP_002842 Length = 2315 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 YQITGGIA 8 Y+++GG++ Sbjct: 110 YRVSGGVS 117>NP_001193767 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 YQITGGIA 8 Y+++GG++ Sbjct: 110 YRVSGGVS 117>XP_005257745 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006722156 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006722155 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006722154 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITGGIAA 9 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQITGGIA 8 + +TGGIA Sbjct: 3349 FLLTGGIA 3356>XP_005255036 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YQITGGIA 8 YQI G+A Sbjct: 663 YQIASGLA 670>XP_006718827 Length = 3479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 Y ITGG Sbjct: 1852 YHITGG 1857>XP_006716139 Length = 1869 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 YQITGGIA 8 Y+++GG++ Sbjct: 110 YRVSGGVS 117>XP_005250576 Length = 2308 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 YQITGGIA 8 Y+++GG++ Sbjct: 110 YRVSGGVS 117>XP_005246991 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>XP_005246990 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YQITGG 6 YQ TGG Sbjct: 720 YQATGG 725>NP_001193768 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 YQITGGIA 8 Y+++GG++ Sbjct: 110 YRVSGGVS 117>NP_149059 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QITGGI 7 Q+TGGI Sbjct: 256 QLTGGI 261Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.139 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 569,495 Number of extensions: 824 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |