Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 22 134 NP_005913 22 134 XP_005267046 22 134 XP_005267045 22 134 NP_064590 18 1482 XP_005277471 18 1482 XP_006711526 18 1482 XP_006711525 18 1482 XP_006711524 18 1482 NP_036423 17 3301 NP_852669 17 3301 NP_059129 17 3301 XP_006719768 17 3301 NP_055553 16 5631 NP_005946 16 5631 XP_005257925 16 5631 XP_005257924 16 5631 XP_005257923 16 5631 XP_005257922 16 5631 XP_005257921 16 5631 XP_006722263 16 5631 XP_005257920 16 5631 NP_005623 16 7355 NP_001273081 16 7355 NP_006384 16 7355 NP_998734 16 7355 NP_001166955 16 7355 XP_005255575 16 7355 XP_005255574 16 7355 XP_005255573 16 7355 XP_006720998 16 7355 XP_005255571 16 7355 XP_006720997 16 7355 XP_006720996 16 7355 XP_006720995 16 7355 XP_006720994 16 7355 XP_005252400 16 7355 XP_005252399 16 7355 NP_570912 15 9605 NP_001193 15 9605 NP_570911 15 9605 NP_000737 15 9605 NP_001177384 15 9605 NP_444252 15 9605 NP_683709 15 9605 NP_647536 15 9605 NP_079425 15 9605 NP_001275899 15 9605 NP_068817 15 9605 NP_002619 15 9605 NP_001317 15 9605 NP_001239160 15 9605 NP_001275898 15 9605 NP_001275897 15 9605 XP_005276529 15 9605 XP_006725626 15 9605 XP_006722173 15 9605 XP_005254807 15 9605 XP_005268072 15 9605 XP_006718217 15 9605 XP_005271911 15 9605 XP_006714586 15 9605>NP_006715 Length = 1558 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQEAMIQGY 9 Y+EAMIQGY Sbjct: 1032 YREAMIQGY 1040>NP_005913 Length = 1608 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQEAMIQGY 9 Y+EAMIQGY Sbjct: 1032 YREAMIQGY 1040>XP_005267046 Length = 1554 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQEAMIQGY 9 Y+EAMIQGY Sbjct: 1032 YREAMIQGY 1040>XP_005267045 Length = 1604 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YQEAMIQGY 9 Y+EAMIQGY Sbjct: 1032 YREAMIQGY 1040>NP_064590 Length = 843 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQE MIQ Y Sbjct: 623 YQEEMIQRY 631>XP_005277471 Length = 764 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQE MIQ Y Sbjct: 544 YQEEMIQRY 552>XP_006711526 Length = 843 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQE MIQ Y Sbjct: 623 YQEEMIQRY 631>XP_006711525 Length = 843 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQE MIQ Y Sbjct: 623 YQEEMIQRY 631>XP_006711524 Length = 843 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQE MIQ Y Sbjct: 623 YQEEMIQRY 631>NP_036423 Length = 2120 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQEAMIQGY 9 Y EA++QG+ Sbjct: 2072 YTEALLQGW 2080>NP_852669 Length = 111 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 Y+E+ QGY Sbjct: 103 YEESTFQGY 111>NP_059129 Length = 1616 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QEAMIQGY 9 +EAMIQ Y Sbjct: 1233 EEAMIQSY 1240>XP_006719768 Length = 2120 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YQEAMIQGY 9 Y EA++QG+ Sbjct: 2072 YTEALLQGW 2080>NP_055553 Length = 1356 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 737 YQRACLSGY 745>NP_005946 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EAMIQGY 9 EAM QGY Sbjct: 87 EAMSQGY 93>XP_005257925 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 201 YQRACLSGY 209>XP_005257924 Length = 1122 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 473 YQRACLSGY 481>XP_005257923 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 482 YQRACLSGY 490>XP_005257922 Length = 1366 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 747 YQRACLSGY 755>XP_005257921 Length = 1370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 751 YQRACLSGY 759>XP_006722263 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 741 YQRACLSGY 749>XP_005257920 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 YQ A + GY Sbjct: 741 YQRACLSGY 749>NP_005623 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 796 WQEARVQG 803>NP_001273081 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YQEAMIQGY 9 +Q+A ++GY Sbjct: 23 FQDAHVRGY 31>NP_006384 Length = 1014 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQ++ QGY Sbjct: 928 YQQSHSQGY 936>NP_998734 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQ++ QGY Sbjct: 184 YQQSHSQGY 192>NP_001166955 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQ++ QGY Sbjct: 184 YQQSHSQGY 192>XP_005255575 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 796 WQEARVQG 803>XP_005255574 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 796 WQEARVQG 803>XP_005255573 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 796 WQEARVQG 803>XP_006720998 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 864 WQEARVQG 871>XP_005255571 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 822 WQEARVQG 829>XP_006720997 Length = 1124 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 834 WQEARVQG 841>XP_006720996 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 863 WQEARVQG 870>XP_006720995 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 864 WQEARVQG 871>XP_006720994 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 864 WQEARVQG 871>XP_005252400 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQ++ QGY Sbjct: 847 YQQSHSQGY 855>XP_005252399 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YQEAMIQGY 9 YQ++ QGY Sbjct: 894 YQQSHSQGY 902>NP_570912 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 YQE +++G Sbjct: 397 YQEMVVEG 404>NP_001193 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 YQE +++G Sbjct: 397 YQEMVVEG 404>NP_570911 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 YQE +++G Sbjct: 397 YQEMVVEG 404>NP_000737 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 183 QEADISGY 190>NP_001177384 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 212 QEADISGY 219>NP_444252 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 18 QEAAIVGY 25>NP_683709 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 2 QEADISGY 9>NP_647536 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 93 QEADISGY 100>NP_079425 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 31 WQEARLQG 38>NP_001275899 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 31 WQEARLQG 38>NP_068817 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QEAMIQGY 9 QE++ QGY Sbjct: 43 QESVSQGY 50>NP_002619 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 18 QEAAIVGY 25>NP_001317 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 Y+E M Q Y Sbjct: 118 YKEKMAQAY 126>NP_001239160 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QEAMIQGY 9 QE++ QGY Sbjct: 43 QESVSQGY 50>NP_001275898 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 31 WQEARLQG 38>NP_001275897 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 31 WQEARLQG 38>XP_005276529 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 93 QEADISGY 100>XP_006725626 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 93 QEADISGY 100>XP_006722173 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 +QEA +QG Sbjct: 31 WQEARLQG 38>XP_005254807 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QEAMIQGY 9 QEA I GY Sbjct: 2 QEADISGY 9>XP_005268072 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YQEAMIQG 8 YQE +++G Sbjct: 397 YQEMVVEG 404>XP_006718217 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YQEAMIQGY 9 Y+E M Q Y Sbjct: 118 YKEKMAQAY 126>XP_005271911 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QEAMIQGY 9 QE++ QGY Sbjct: 43 QESVSQGY 50>XP_006714586 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QEAMIQGY 9 QE++ QGY Sbjct: 43 QESVSQGY 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,556 Number of extensions: 954 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |