Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_000954 19 665 NP_005018 18 1135 NP_056053 17 3301 NP_653252 17 3301 NP_001155134 17 3301 NP_001155133 17 3301 XP_005251225 17 3301 XP_006716483 17 3301 XP_005251224 17 3301 XP_006714899 17 3301 XP_005265910 17 3301 XP_006714898 17 3301 XP_005265909 17 3301 XP_005265908 17 3301 XP_005265907 17 3301 NP_542158 17 4312 NP_001258297 17 4312 NP_000953 17 4312 NP_001258094 17 4312 NP_001258296 17 4312 NP_001258093 17 4312 NP_001258095 17 4312 XP_006717255 17 4312 XP_005252162 17 4312 NP_115266 17 4312 NP_061745 17 4312 NP_001810 16 5631 NP_006132 16 5631 NP_002949 16 5631 NP_001273086 16 5631 NP_001005861 16 5631 NP_001073867 16 7355 NP_001171890 16 7355 NP_001171891 16 7355 NP_055883 16 7355 NP_005622 16 7355 NP_001035242 16 7355 NP_001165908 16 7355 NP_001165909 16 7355 NP_114088 16 7355 NP_061721 16 7355 NP_258260 16 7355 XP_005251911 16 7355 XP_005251910 16 7355 XP_005251909 16 7355 XP_005251908 16 7355 XP_005251907 16 7355 XP_006714867 16 7355 XP_006714866 16 7355 XP_005268581 16 7355 NP_115271 16 7355 NP_061749 16 7355 NP_000008 15 9605 NP_002827 15 9605 NP_543031 15 9605 NP_543030 15 9605 NP_006835 15 9605 XP_005259774 15 9605 XP_005270222 15 9605 NP_006840 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 YPAL+VEKM Sbjct: 3442 YPALVVEKM 3450>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 YPAL+VEKM Sbjct: 3442 YPALVVEKM 3450>NP_000954 Length = 604 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YPALMVEK 8 YPAL+VEK Sbjct: 490 YPALLVEK 497>NP_005018 Length = 728 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 +PAL+VEK+ Sbjct: 279 FPALLVEKL 287>NP_056053 Length = 1113 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 882 YPALKVDK 889>NP_653252 Length = 1463 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YPALMVEKM 9 +PALMVE + Sbjct: 1197 WPALMVEDL 1205>NP_001155134 Length = 1118 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 882 YPALKVDK 889>NP_001155133 Length = 1119 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 882 YPALKVDK 889>XP_005251225 Length = 848 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YPALMVEKM 9 +PALMVE + Sbjct: 582 WPALMVEDL 590>XP_006716483 Length = 1367 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YPALMVEKM 9 +PALMVE + Sbjct: 1101 WPALMVEDL 1109>XP_005251224 Length = 1439 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YPALMVEKM 9 +PALMVE + Sbjct: 1173 WPALMVEDL 1181>XP_006714899 Length = 881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 644 YPALKVDK 651>XP_005265910 Length = 1112 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 882 YPALKVDK 889>XP_006714898 Length = 1117 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 887 YPALKVDK 894>XP_005265909 Length = 1118 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 887 YPALKVDK 894>XP_005265908 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 887 YPALKVDK 894>XP_005265907 Length = 1124 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YPAL V+K Sbjct: 887 YPALKVDK 894>NP_542158 Length = 562 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 466 YPGLLLEK 473>NP_001258297 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 441 YPGLLLEK 448>NP_000953 Length = 599 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 503 YPGLLLEK 510>NP_001258094 Length = 490 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 394 YPGLLLEK 401>NP_001258296 Length = 453 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 357 YPGLLLEK 364>NP_001258093 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 455 YPGLLLEK 462>NP_001258095 Length = 453 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 357 YPGLLLEK 364>XP_006717255 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 441 YPGLLLEK 448>XP_005252162 Length = 574 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 478 YPGLLLEK 485>NP_115266 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 188 YPVLLLEK 195>NP_061745 Length = 927 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 188 YPVLLLEK 195>NP_001810 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YPALMVEKM 9 YP+L ++KM Sbjct: 389 YPSLELDKM 397>NP_006132 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PALMVEK 8 PAL+VEK Sbjct: 299 PALVVEK 305>NP_002949 Length = 607 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L +EK Sbjct: 298 YPTLRIEK 305>NP_001273086 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PALMVEK 8 PAL+VEK Sbjct: 222 PALVVEK 228>NP_001005861 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L +EK Sbjct: 301 YPTLRIEK 308>NP_001073867 Length = 2017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L VEK Sbjct: 279 YPRLPVEK 286>NP_001171890 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YPALMVE 7 YPA M+E Sbjct: 181 YPAFMME 187>NP_001171891 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YPALMVE 7 YPA M+E Sbjct: 181 YPAFMME 187>NP_055883 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YPALMVE 7 YPA M+E Sbjct: 147 YPAFMME 153>NP_005622 Length = 787 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PALMVEKM 9 P+L+VEK+ Sbjct: 513 PSLLVEKI 520>NP_001035242 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YPALMVE 7 YPA M+E Sbjct: 147 YPAFMME 153>NP_001165908 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YPALMVE 7 YPA M+E Sbjct: 223 YPAFMME 229>NP_001165909 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YPALMVE 7 YPA M+E Sbjct: 223 YPAFMME 229>NP_114088 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 182 YPELVLEK 189>NP_061721 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YPALMVEK 8 YP L++EK Sbjct: 182 YPELVLEK 189>NP_258260 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 +P+L+VE++ Sbjct: 599 FPSLLVEEL 607>XP_005251911 Length = 1839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L VEK Sbjct: 101 YPRLPVEK 108>XP_005251910 Length = 1839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L VEK Sbjct: 101 YPRLPVEK 108>XP_005251909 Length = 1839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L VEK Sbjct: 101 YPRLPVEK 108>XP_005251908 Length = 1839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L VEK Sbjct: 101 YPRLPVEK 108>XP_005251907 Length = 1845 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP L VEK Sbjct: 107 YPRLPVEK 114>XP_006714867 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 +P+L+VE++ Sbjct: 599 FPSLLVEEL 607>XP_006714866 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 +P+L+VE++ Sbjct: 556 FPSLLVEEL 564>XP_005268581 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YPALMVEKM 9 +P+L+VE++ Sbjct: 597 FPSLLVEEL 605>NP_115271 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 YP L +EK+ Sbjct: 191 YPELSLEKL 199>NP_061749 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 YP L +EK+ Sbjct: 191 YPELSLEKL 199>NP_000008 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 +PA V+KM Sbjct: 66 FPAAQVKKM 74>NP_002827 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 YP L V+K+ Sbjct: 218 YPPLPVDKL 226>NP_543031 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 YP L V+K+ Sbjct: 209 YPPLPVDKL 217>NP_543030 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 YP L V+K+ Sbjct: 209 YPPLPVDKL 217>NP_006835 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP MV+K Sbjct: 214 YPYFMVQK 221>XP_005259774 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YPALMVEK 8 YP MV+K Sbjct: 214 YPYFMVQK 221>XP_005270222 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YPALMVEKM 9 YP L +EK+ Sbjct: 500 YPRLDIEKV 508>NP_006840 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YPALMVE 7 +PAL+VE Sbjct: 59 HPALLVE 65Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 447,758 Number of extensions: 514 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |