Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 21 175 NP_001263689 21 175 NP_001119584 21 175 NP_001119586 21 175 NP_001263625 21 175 NP_001119590 21 175 NP_001263690 21 175 NP_001119585 21 175 NP_001263624 21 175 NP_001119588 21 175 NP_001119587 21 175 NP_001119589 21 175 NP_001263627 21 175 NP_001263628 21 175 NP_001263626 21 175 NP_001108451 18 1482 NP_001108454 18 1482 NP_003713 18 1482 NP_001108450 18 1482 NP_001108452 18 1482 NP_001108453 18 1482 NP_001191121 18 1482 NP_001119713 18 1482 NP_001191117 18 1482 NP_001119712 18 1482 NP_001119714 18 1482 NP_005418 18 1482 NP_001191116 18 1482 NP_001191115 18 1482 NP_001191119 18 1482 NP_001191113 18 1482 NP_001191118 18 1482 NP_001191120 18 1482 NP_001191114 18 1482 XP_005247903 18 1482 XP_005247901 18 1482 XP_005247900 18 1482 NP_001012271 17 2528 NP_997352 17 2528 XP_005259007 17 2528 NP_062544 17 2528 NP_001269579 17 3301 NP_001182068 17 4312 NP_056201 17 4312 XP_006721237 17 4312 NP_001006658 16 5631 NP_065830 16 5631 NP_001245280 16 5631 NP_005308 16 5631 NP_783859 16 7355 NP_060233 16 7355 NP_001135828 16 7355 NP_001129511 16 7355 XP_006712739 16 7355 XP_005246799 16 7355 NP_002301 15 9605 NP_001121143 15 9605 NP_001274426 15 9605 NP_071929 15 9605 NP_001120936 15 9605 NP_001085 15 9605 XP_005260057 15 9605 XP_006722865 15 9605 NP_005469 15 9605 NP_899233 15 9605>NP_000537 Length = 393 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 236 YMCNSSCMG 244>NP_001263689 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 197 YMCNSSCMG 205>NP_001119584 Length = 393 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 236 YMCNSSCMG 244>NP_001119586 Length = 341 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 236 YMCNSSCMG 244>NP_001263625 Length = 302 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 197 YMCNSSCMG 205>NP_001119590 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 197 YMCNSSCMG 205>NP_001263690 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 197 YMCNSSCMG 205>NP_001119585 Length = 346 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 236 YMCNSSCMG 244>NP_001263624 Length = 307 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 197 YMCNSSCMG 205>NP_001119588 Length = 209 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 104 YMCNSSCMG 112>NP_001119587 Length = 261 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 104 YMCNSSCMG 112>NP_001119589 Length = 214 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 104 YMCNSSCMG 112>NP_001263627 Length = 182 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 77 YMCNSSCMG 85>NP_001263628 Length = 187 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 77 YMCNSSCMG 85>NP_001263626 Length = 234 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 YMCNSS MG Sbjct: 77 YMCNSSCMG 85>NP_001108451 Length = 487 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 306 FMCNSSCVG 314>NP_001108454 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 212 FMCNSSCVG 220>NP_003713 Length = 680 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 306 FMCNSSCVG 314>NP_001108450 Length = 555 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 306 FMCNSSCVG 314>NP_001108452 Length = 586 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 212 FMCNSSCVG 220>NP_001108453 Length = 461 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 212 FMCNSSCVG 220>NP_001191121 Length = 565 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 185 FMCNSSCVG 193>NP_001119713 Length = 450 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 207 FMCNSSCVG 215>NP_001191117 Length = 540 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 256 FMCNSSCVG 264>NP_001119712 Length = 587 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 207 FMCNSSCVG 215>NP_001119714 Length = 426 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 207 FMCNSSCVG 215>NP_005418 Length = 636 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 256 FMCNSSCVG 264>NP_001191116 Length = 555 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 256 FMCNSSCVG 264>NP_001191115 Length = 403 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 256 FMCNSSCVG 264>NP_001191119 Length = 506 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 207 FMCNSSCVG 215>NP_001191113 Length = 499 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 256 FMCNSSCVG 264>NP_001191118 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 207 FMCNSSCVG 215>NP_001191120 Length = 491 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 207 FMCNSSCVG 215>NP_001191114 Length = 475 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 256 FMCNSSCVG 264>XP_005247903 Length = 483 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 306 FMCNSSCVG 314>XP_005247901 Length = 663 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 289 FMCNSSCVG 297>XP_005247900 Length = 676 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 +MCNSS +G Sbjct: 306 FMCNSSCVG 314>NP_001012271 Length = 165 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YMCNSSRMG 9 Y CN+S +G Sbjct: 81 YACNTSTLG 89>NP_997352 Length = 95 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YMCNSSR 7 +MCN+SR Sbjct: 47 FMCNASR 53>XP_005259007 Length = 144 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 Y+CNS+ +G Sbjct: 123 YICNSTLVG 131>NP_062544 Length = 254 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YMCNSSRMG 9 Y+CNS+ +G Sbjct: 233 YICNSTLVG 241>NP_001269579 Length = 406 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MCNSSRMG 9 +C SSRMG Sbjct: 34 VCPSSRMG 41>NP_001182068 Length = 768 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MCNSSRMG 9 +CN RMG Sbjct: 497 LCNKLRMG 504>NP_056201 Length = 789 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MCNSSRMG 9 +CN RMG Sbjct: 497 LCNKLRMG 504>XP_006721237 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MCNSSRMG 9 +CN RMG Sbjct: 355 LCNKLRMG 362>NP_001006658 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CNSSRM 8 CNSSR+ Sbjct: 553 CNSSRL 558>NP_065830 Length = 1170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CNSSRM 8 CNSSR+ Sbjct: 542 CNSSRL 547>NP_001245280 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MCNSSR 7 MCN+SR Sbjct: 136 MCNNSR 141>NP_005308 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MCNSSR 7 MCN+SR Sbjct: 175 MCNNSR 180>NP_783859 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YMCNSSR 7 ++CNSS+ Sbjct: 79 FLCNSSQ 85>NP_060233 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 YMCNSS 6 Y+CN+S Sbjct: 89 YLCNAS 94>NP_001135828 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MCNSSR 7 +CNSSR Sbjct: 20 ICNSSR 25>NP_001129511 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MCNSSR 7 +CNSSR Sbjct: 20 ICNSSR 25>XP_006712739 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MCNSSR 7 +CNSSR Sbjct: 20 ICNSSR 25>XP_005246799 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MCNSSR 7 +CNSSR Sbjct: 20 ICNSSR 25>NP_002301 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CNSSR 7 CNSSR Sbjct: 662 CNSSR 666>NP_001121143 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CNSSR 7 CNSSR Sbjct: 662 CNSSR 666>NP_001274426 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YMCNSS 6 Y CNSS Sbjct: 595 YNCNSS 600>NP_071929 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YMCNSS 6 Y CNSS Sbjct: 595 YNCNSS 600>NP_001120936 Length = 3925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 YMCNSSRMG 9 YMC R G Sbjct: 3118 YMCVERRFG 3126>NP_001085 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CNSSRMG 9 C SS MG Sbjct: 289 CRSSEMG 295>XP_005260057 Length = 2113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CNSSR 7 CNSSR Sbjct: 945 CNSSR 949>XP_006722865 Length = 2078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CNSSR 7 CNSSR Sbjct: 910 CNSSR 914>NP_005469 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YMCNSSR 7 Y+C SSR Sbjct: 39 YICASSR 45>NP_899233 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 CNSSRMG 9 C SS MG Sbjct: 340 CRSSEMG 346Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.127 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 532,093 Number of extensions: 692 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |