Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 NP_006022 20 299 XP_005261186 20 299 XP_005261185 20 299 XP_005261184 20 299 XP_005261183 20 299 XP_005261182 20 299 XP_005261181 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_060988 17 2528 NP_877428 17 2528 NP_001612 17 4312 NP_001004439 16 5631 NP_001106197 16 5631 NP_055820 16 5631 XP_005254285 16 5631 XP_005267607 16 5631 NP_056982 16 7355 NP_004406 16 7355 NP_004466 16 7355 NP_940859 16 7355 XP_006723121 16 7355 XP_006723120 16 7355 XP_006723119 16 7355 XP_006723118 16 7355 XP_006723117 16 7355 XP_005258633 16 7355 XP_005259627 16 7355 XP_005259628 16 7355 XP_005259629 16 7355 XP_005258010 16 7355 XP_005258009 16 7355 XP_005258007 16 7355 NP_112571 15 9605 NP_872603 15 9605 NP_001182317 15 9605 NP_001004298 15 9605 NP_001273612 15 9605 NP_065831 15 9605 XP_005269549 15 9605 XP_005269548 15 9605 XP_006714294 15 9605 NP_057312 15 9605 NP_001273611 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3705 YLRAESFRK 3713>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3697 YLRAESFRK 3705>NP_006022 Length = 3336 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3139 YLRAESFRK 3147>XP_005261186 Length = 3139 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 2942 YLRAESFRK 2950>XP_005261185 Length = 3229 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3032 YLRAESFRK 3040>XP_005261184 Length = 3258 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3150 YLRAESFRK 3158>XP_005261183 Length = 3268 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3071 YLRAESFRK 3079>XP_005261182 Length = 3346 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3149 YLRAESFRK 3157>XP_005261181 Length = 3347 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3150 YLRAESFRK 3158>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3658 YLRAESFRK 3666>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3737 YLRAESFRK 3745>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YLRAESFQK 9 YLRAESF+K Sbjct: 3750 YLRAESFRK 3758>NP_060988 Length = 874 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLRAESFQK 9 YL +E FQK Sbjct: 724 YLESEEFQK 732>NP_877428 Length = 875 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLRAESFQK 9 YL +E FQK Sbjct: 725 YLESEEFQK 733>NP_001612 Length = 848 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YLRAESF 7 YLRA+SF Sbjct: 76 YLRAKSF 82>NP_001004439 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLRAESFQK 9 + R+E+FQK Sbjct: 248 FARSEAFQK 256>NP_001106197 Length = 1554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLRAESFQK 9 +LR ESF K Sbjct: 863 FLRQESFTK 871>NP_055820 Length = 1519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLRAESFQK 9 +LR ESF K Sbjct: 793 FLRQESFTK 801>XP_005254285 Length = 1086 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLRAESFQK 9 + R+E+FQK Sbjct: 146 FARSEAFQK 154>XP_005267607 Length = 1589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLRAESFQK 9 +LR ESF K Sbjct: 863 FLRQESFTK 871>NP_056982 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 +RA++FQK Sbjct: 376 IRAKAFQK 383>NP_004406 Length = 2871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLRAESFQK 9 +LR E FQK Sbjct: 1679 HLRNEHFQK 1687>NP_004466 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 L+AE++QK Sbjct: 343 LKAEAYQK 350>NP_940859 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 156 YMREKSFQ 163>XP_006723121 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 225 YMREKSFQ 232>XP_006723120 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 225 YMREKSFQ 232>XP_006723119 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 225 YMREKSFQ 232>XP_006723118 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 225 YMREKSFQ 232>XP_006723117 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 225 YMREKSFQ 232>XP_005258633 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLRAESFQ 8 Y+R +SFQ Sbjct: 225 YMREKSFQ 232>XP_005259627 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 +RA++FQK Sbjct: 376 IRAKAFQK 383>XP_005259628 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 +RA++FQK Sbjct: 376 IRAKAFQK 383>XP_005259629 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 +RA++FQK Sbjct: 376 IRAKAFQK 383>XP_005258010 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 L+AE++QK Sbjct: 266 LKAEAYQK 273>XP_005258009 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 L+AE++QK Sbjct: 294 LKAEAYQK 301>XP_005258007 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LRAESFQK 9 L+AE++QK Sbjct: 343 LKAEAYQK 350>NP_112571 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LRAESFQ 8 LRA SFQ Sbjct: 194 LRASSFQ 200>NP_872603 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 +RA+SF K Sbjct: 256 IRADSFSK 263>NP_001182317 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LRAESFQ 8 LRA SFQ Sbjct: 194 LRASSFQ 200>NP_001004298 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 LRAE F+K Sbjct: 680 LRAEVFKK 687>NP_001273612 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 +RA+SF K Sbjct: 256 IRADSFSK 263>NP_065831 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLRAESF 7 YLR ESF Sbjct: 1140 YLRWESF 1146>XP_005269549 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 LRAE F+K Sbjct: 273 LRAEVFKK 280>XP_005269548 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 LRAE F+K Sbjct: 719 LRAEVFKK 726>XP_006714294 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 +RA+SF K Sbjct: 295 IRADSFSK 302>NP_057312 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 +RA+SF K Sbjct: 256 IRADSFSK 263>NP_001273611 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRAESFQK 9 +RA+SF K Sbjct: 260 IRADSFSK 267Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.131 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,231 Number of extensions: 721 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |