Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000224 19 869 NP_852111 19 869 NP_000136 19 869 NP_000360 19 869 XP_005268094 19 869 XP_005264366 19 869 XP_006712078 19 869 NP_705618 17 2528 NP_004289 17 2528 NP_001265241 17 2528 NP_001263629 17 3301 NP_612202 17 3301 NP_000907 17 4312 NP_056161 17 4312 XP_006720156 17 4312 NP_001005213 16 5631 NP_001013376 16 5631 NP_001136245 16 7355 NP_001136239 16 7355 NP_065394 16 7355 NP_001136236 16 7355 NP_001136244 16 7355 NP_001136238 16 7355 NP_001136240 16 7355 NP_001136243 16 7355 NP_001136242 16 7355 NP_001136235 16 7355 NP_001136237 16 7355 NP_001136241 16 7355 NP_149045 16 7355 NP_006085 16 7355 NP_001157743 16 7355 NP_872584 16 7355 XP_006718013 16 7355 XP_005273432 16 7355 XP_005273431 16 7355 NP_001004479 16 7355 NP_002151 15 9605 NP_005497 15 9605 NP_001165402 15 9605 NP_001165401 15 9605 NP_071407 15 9605 NP_001191184 15 9605 XP_006718005 15 9605 XP_006718004 15 9605 XP_006718003 15 9605 XP_005252032 15 9605 XP_006717164 15 9605 XP_005252031 15 9605 XP_005252030 15 9605 XP_006717163 15 9605 XP_006717162 15 9605 XP_006717161 15 9605 XP_006717160 15 9605 XP_005252029 15 9605 XP_006717159 15 9605 XP_005275746 15 9605 XP_003403671 15 9605 XP_006710003 15 9605 NP_076411 15 9605>NP_000224 Length = 699 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 411 YLLLIASVD 419>NP_852111 Length = 669 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 388 YLLLIASVD 396>NP_000136 Length = 695 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 414 YLLLIASVD 422>NP_000360 Length = 764 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 466 YLLLIASVD 474>XP_005268094 Length = 764 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 466 YLLLIASVD 474>XP_005264366 Length = 380 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 92 YLLLIASVD 100>XP_006712078 Length = 389 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLLI SVD Sbjct: 101 YLLLIASVD 109>NP_705618 Length = 1391 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL ITS D Sbjct: 214 YLLTITSTD 222>NP_004289 Length = 1332 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL ITS D Sbjct: 155 YLLTITSTD 163>NP_001265241 Length = 1327 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL ITS D Sbjct: 214 YLLTITSTD 222>NP_001263629 Length = 891 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 YLLLITSV 8 YLL ITSV Sbjct: 419 YLLFITSV 426>NP_612202 Length = 892 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 YLLLITSV 8 YLL ITSV Sbjct: 419 YLLFITSV 426>NP_000907 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 YLLL+ S+D Sbjct: 128 YLLLLMSLD 136>NP_056161 Length = 2539 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLLITSVD 9 LLLITS D Sbjct: 581 LLLITSAD 588>XP_006720156 Length = 2497 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLLITSVD 9 LLLITS D Sbjct: 581 LLLITSAD 588>NP_001005213 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLLLITSV 8 YL +ITSV Sbjct: 217 YLFIITSV 224>NP_001013376 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YLLLITSV 8 YL +ITSV Sbjct: 217 YLFIITSV 224>NP_001136245 Length = 1932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 662 YILIITASD 670>NP_001136239 Length = 1915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 647 YILIITASD 655>NP_065394 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLLLITS 7 Y+LL+TS Sbjct: 355 YILLVTS 361>NP_001136236 Length = 1957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 684 YILIITASD 692>NP_001136244 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 684 YILIITASD 692>NP_001136238 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 684 YILIITASD 692>NP_001136240 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 662 YILIITASD 670>NP_001136243 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 689 YILIITASD 697>NP_001136242 Length = 1539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 684 YILIITASD 692>NP_001136235 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 689 YILIITASD 697>NP_001136237 Length = 1886 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 613 YILIITASD 621>NP_001136241 Length = 1790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 696 YILIITASD 704>NP_149045 Length = 1955 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 684 YILIITASD 692>NP_006085 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLITSVD 9 LL+TSVD Sbjct: 1007 LLLTSVD 1013>NP_001157743 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLITSVD 9 LL+TSVD Sbjct: 933 LLLTSVD 939>NP_872584 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLITSVD 9 LL+TSVD Sbjct: 1444 LLLTSVD 1450>XP_006718013 Length = 1778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L+IT+ D Sbjct: 684 YILIITASD 692>XP_005273432 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLITSVD 9 LL+TSVD Sbjct: 1041 LLLTSVD 1047>XP_005273431 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLITSVD 9 LL+TSVD Sbjct: 1444 LLLTSVD 1450>NP_001004479 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YLLLITSV 8 Y+LL+T+V Sbjct: 228 YILLLTAV 235>NP_002151 Length = 2201 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1917 YLLVYESVD 1925>NP_005497 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLLITSV 8 LLL+TSV Sbjct: 15 LLLVTSV 21>NP_001165402 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 742 YILIVRAVD 750>NP_001165401 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 742 YILIVRAVD 750>NP_071407 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 742 YILIVRAVD 750>NP_001191184 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLLITSV 8 LLL+TSV Sbjct: 15 LLLVTSV 21>XP_006718005 Length = 3397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 785 YILIVRAVD 793>XP_006718004 Length = 3399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 787 YILIVRAVD 795>XP_006718003 Length = 3419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 807 YILIVRAVD 815>XP_005252032 Length = 1564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1280 YLLVYESVD 1288>XP_006717164 Length = 1655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1371 YLLVYESVD 1379>XP_005252031 Length = 1655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1371 YLLVYESVD 1379>XP_005252030 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1553 YLLVYESVD 1561>XP_006717163 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1644 YLLVYESVD 1652>XP_006717162 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1644 YLLVYESVD 1652>XP_006717161 Length = 2019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1735 YLLVYESVD 1743>XP_006717160 Length = 2110 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1826 YLLVYESVD 1834>XP_005252029 Length = 2110 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 1826 YLLVYESVD 1834>XP_006717159 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YLLLITSVD 9 YLL+ SVD Sbjct: 2009 YLLVYESVD 2017>XP_005275746 Length = 3352 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 740 YILIVRAVD 748>XP_003403671 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 742 YILIVRAVD 750>XP_006710003 Length = 3374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLLLITSVD 9 Y+L++ +VD Sbjct: 762 YILIVRAVD 770>NP_076411 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLLITSV 8 LLL+TSV Sbjct: 133 LLLVTSV 139Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.150 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 355,204 Number of extensions: 577 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |