Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138390 18 1135 NP_001138386 18 1135 NP_001138387 18 1135 NP_000132 18 1135 NP_075259 18 1135 NP_001138388 18 1135 NP_001138391 18 1135 NP_001138385 18 1135 NP_075418 18 1135 XP_006717776 18 1135 XP_006717775 18 1135 XP_006717774 18 1135 XP_006717773 18 1135 XP_006717772 18 1135 XP_006717771 18 1135 NP_001127890 17 4312 NP_060662 17 4312 NP_942133 16 7355 NP_942131 16 7355 NP_942134 16 7355 NP_942135 16 7355 NP_942136 16 7355 NP_787125 16 7355 NP_055478 16 7355 XP_006725385 16 7355 XP_006725384 16 7355 XP_006725383 16 7355 XP_005257325 16 7355 XP_005257324 16 7355 XP_005257323 16 7355 XP_006721916 16 7355 XP_006719430 16 7355 XP_006719429 16 7355 XP_006719428 16 7355 XP_005253933 16 7355 XP_005271413 16 7355 XP_005271412 16 7355 XP_005271411 16 7355 NP_004106 16 7355 NP_001084 16 7355 NP_006112 15 9605 NP_006811 15 9605>NP_001138390 Length = 704 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 260 YLEIAIYCI 268>NP_001138386 Length = 709 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 263 YLEIAIYCI 271>NP_001138387 Length = 707 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 286 YLEIAIYCI 294>NP_000132 Length = 821 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 375 YLEIAIYCI 383>NP_075259 Length = 822 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 376 YLEIAIYCI 384>NP_001138388 Length = 706 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 260 YLEIAIYCI 268>NP_001138391 Length = 680 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 287 YLEIAIYCI 295>NP_001138385 Length = 769 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 376 YLEIAIYCI 384>NP_075418 Length = 732 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 286 YLEIAIYCI 294>XP_006717776 Length = 806 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 394 YLEIAIYCI 402>XP_006717775 Length = 726 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 280 YLEIAIYCI 288>XP_006717774 Length = 752 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 306 YLEIAIYCI 314>XP_006717773 Length = 807 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 395 YLEIAIYCI 403>XP_006717772 Length = 838 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 394 YLEIAIYCI 402>XP_006717771 Length = 839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLEIAIYRI 9 YLEIAIY I Sbjct: 395 YLEIAIYCI 403>NP_001127890 Length = 527 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLEIAIYRI 9 YL+ A YR+ Sbjct: 130 YLQFAYYRV 138>NP_060662 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLEIAIYRI 9 YL+ A YR+ Sbjct: 311 YLQFAYYRV 319>NP_942133 Length = 2346 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1539 YLDISLYK 1546>NP_942131 Length = 2383 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1576 YLDISLYK 1583>NP_942134 Length = 2288 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1481 YLDISLYK 1488>NP_942135 Length = 2268 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1461 YLDISLYK 1468>NP_942136 Length = 2346 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1539 YLDISLYK 1546>NP_787125 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LEIAIYR 8 LE+A+YR Sbjct: 206 LEVAMYR 212>NP_055478 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLEIAIYR 8 Y+E A+YR Sbjct: 1053 YIEPALYR 1060>XP_006725385 Length = 2038 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1231 YLDISLYK 1238>XP_006725384 Length = 2268 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1461 YLDISLYK 1468>XP_006725383 Length = 2338 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1531 YLDISLYK 1538>XP_005257325 Length = 2038 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1231 YLDISLYK 1238>XP_005257324 Length = 2268 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1461 YLDISLYK 1468>XP_005257323 Length = 2268 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1461 YLDISLYK 1468>XP_006721916 Length = 2375 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1568 YLDISLYK 1575>XP_006719430 Length = 2256 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1456 YLDISLYK 1463>XP_006719429 Length = 2395 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1595 YLDISLYK 1602>XP_006719428 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1658 YLDISLYK 1665>XP_005253933 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1658 YLDISLYK 1665>XP_005271413 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLEIAIYR 8 Y+E A+YR Sbjct: 962 YIEPALYR 969>XP_005271412 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLEIAIYR 8 Y+E A+YR Sbjct: 1053 YIEPALYR 1060>XP_005271411 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLEIAIYR 8 Y+E A+YR Sbjct: 1053 YIEPALYR 1060>NP_004106 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LEIAIYR 8 LE+A+YR Sbjct: 201 LEVAMYR 207>NP_001084 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLEIAIYR 8 YL+I++Y+ Sbjct: 1658 YLDISLYK 1665>NP_006112 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LEIAIYR 8 LEIA YR Sbjct: 477 LEIATYR 483>NP_006811 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 YLEIAIYRI 9 YLE ++R+ Sbjct: 150 YLECEVFRV 158Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.161 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,302 Number of extensions: 904 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |