Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_001029031 17 4312 NP_001257377 17 4312 NP_000009 17 4312 NP_001257376 17 4312 XP_006721579 17 4312 NP_001073893 16 5631 XP_006721547 16 5631 XP_005256611 16 5631 XP_005256609 16 5631 XP_005256607 16 5631 XP_005256608 16 5631 XP_006721546 16 5631 XP_005256606 16 5631 NP_000757 16 7355 NP_000753 16 7355 NP_001129977 16 7355 NP_001009571 16 7355 NP_060424 16 7355 NP_001161412 16 7355 NP_060547 16 7355 NP_085079 16 7355 NP_000755 16 7355 XP_006721240 16 7355 XP_005250765 16 7355 XP_005250764 16 7355 XP_005250763 16 7355 XP_005250762 16 7355 XP_005250761 16 7355 XP_005250760 16 7355 XP_005250759 16 7355 XP_005250758 16 7355 XP_005250757 16 7355 XP_005250756 16 7355 XP_005250755 16 7355 XP_005250754 16 7355 XP_005250753 16 7355 XP_005250752 16 7355 XP_006716105 16 7355 NP_001159607 16 7355 NP_005338 15 9605 NP_001005191 15 9605 NP_001034852 15 9605 NP_001091873 15 9605 NP_001091872 15 9605 NP_065778 15 9605 NP_004555 15 9605 XP_005261180 15 9605 XP_005261178 15 9605 XP_006714733 15 9605 XP_005263120 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1452 LAKSVDHS 1459>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1452 LAKSVDHS 1459>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 LAKSVDHS Sbjct: 1453 LAKSVDHS 1460>NP_001029031 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 +AK+VDH+ Sbjct: 334 IAKAVDHA 341>NP_001257377 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 +AK+VDH+ Sbjct: 280 IAKAVDHA 287>NP_000009 Length = 655 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 +AK+VDH+ Sbjct: 356 IAKAVDHA 363>NP_001257376 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 +AK+VDH+ Sbjct: 379 IAKAVDHA 386>XP_006721579 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LAKSVDHS 9 +AK+VDH+ Sbjct: 402 IAKAVDHA 409>NP_001073893 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_006721547 Length = 1638 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_005256611 Length = 1643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_005256609 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_005256607 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_005256608 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_006721546 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>XP_005256606 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLAKSVD 7 YLA+S+D Sbjct: 576 YLARSID 582>NP_000757 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 ++AK V+H+ Sbjct: 247 FIAKKVEHN 255>NP_000753 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 ++AK V+H+ Sbjct: 247 FIAKKVEHN 255>NP_001129977 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKSVDHS 9 LAKS +HS Sbjct: 66 LAKSSEHS 73>NP_001009571 Length = 1255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 692 YLAELMEHS 700>NP_060424 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>NP_001161412 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>NP_060547 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKSVDHS 9 AKS DHS Sbjct: 278 AKSSDHS 284>NP_085079 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 ++AK V+H+ Sbjct: 196 FIAKKVEHN 204>NP_000755 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 ++AK V+H+ Sbjct: 247 FIAKKVEHN 255>XP_006721240 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKSVDHS 9 LAKS +HS Sbjct: 66 LAKSSEHS 73>XP_005250765 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 692 YLAELMEHS 700>XP_005250764 Length = 1258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250763 Length = 1260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 692 YLAELMEHS 700>XP_005250762 Length = 1260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250761 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250760 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250759 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 692 YLAELMEHS 700>XP_005250758 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250757 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 692 YLAELMEHS 700>XP_005250756 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250755 Length = 1303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250754 Length = 1305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 692 YLAELMEHS 700>XP_005250753 Length = 1305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_005250752 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLAKSVDHS 9 YLA+ ++HS Sbjct: 695 YLAELMEHS 703>XP_006716105 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKSVDHS 9 AKS DHS Sbjct: 278 AKSSDHS 284>NP_001159607 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AKSVDHS 9 AKS DHS Sbjct: 137 AKSSDHS 143>NP_005338 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YLAKSVDHS 9 YL K V H+ Sbjct: 160 YLGKKVTHA 168>NP_001005191 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLAKSVDHS 9 YL+ +V HS Sbjct: 259 YLSSAVTHS 267>NP_001034852 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LAKSVDH 8 LAK +DH Sbjct: 592 LAKIIDH 598>NP_001091873 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKSVDHS 9 AKS++HS Sbjct: 217 AKSLEHS 223>NP_001091872 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKSVDHS 9 AKS++HS Sbjct: 217 AKSLEHS 223>NP_065778 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKSVDHS 9 AKS++HS Sbjct: 217 AKSLEHS 223>NP_004555 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLAKSVDH 8 +LAK++D+ Sbjct: 287 FLAKAIDY 294>XP_005261180 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKSVDHS 9 AKS++HS Sbjct: 217 AKSLEHS 223>XP_005261178 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKSVDHS 9 AKS++HS Sbjct: 217 AKSLEHS 223>XP_006714733 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LAKSVDH 8 LAK +DH Sbjct: 592 LAKIIDH 598>XP_005263120 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 YLAKSVDH 8 +LAK++D+ Sbjct: 287 FLAKAIDY 294Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.121 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,854 Number of extensions: 597 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |