Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 665 NP_071754 19 665 NP_001185763 19 665 NP_001002810 19 665 NP_055459 19 665 NP_001182189 19 665 NP_001002812 19 665 NP_001182190 19 665 XP_006711719 19 665 XP_006711717 19 665 XP_006711716 19 665 XP_006711715 19 665 XP_006711714 19 665 XP_006711713 19 665 XP_006711710 19 665 XP_006711709 19 665 NP_060719 17 3301 NP_001258968 17 3301 NP_001011649 17 3301 XP_006717248 17 3301 XP_006717247 17 3301 XP_006717246 17 3301 XP_006717245 17 3301 XP_006717244 17 3301 XP_006717243 17 3301 XP_006717242 17 3301 NP_004953 17 4312 XP_006717825 17 4312 NP_001124295 16 7355 NP_001370 16 7355 NP_055693 16 7355 XP_006723127 16 7355 XP_006722744 16 7355 NP_689816 16 7355 NP_000811 15 9605 NP_001137417 15 9605 NP_001137418 15 9605 NP_001276081 15 9605 NP_001170990 15 9605 NP_001276082 15 9605 NP_001276083 15 9605 NP_775966 15 9605 NP_056386 15 9605 NP_055907 15 9605 NP_001192 15 9605 XP_005255242 15 9605 XP_005255241 15 9605 XP_005255240 15 9605 XP_005255239 15 9605 XP_006715520 15 9605 XP_006714354 15 9605 NP_001093879 15 9605>NP_001185761 Length = 2240 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 111 YKRNIELKV 119>NP_071754 Length = 310 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 182 YKRNIELKV 190>NP_001185763 Length = 2362 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 45 YKRNIELKV 53>NP_001002810 Length = 173 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 45 YKRNIELKV 53>NP_055459 Length = 2346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 45 YKRNIELKV 53>NP_001182189 Length = 141 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 13 YKRNIELKV 21>NP_001002812 Length = 969 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 45 YKRNIELKV 53>NP_001182190 Length = 176 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 48 YKRNIELKV 56>XP_006711719 Length = 2302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 111 YKRNIELKV 119>XP_006711717 Length = 2385 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 111 YKRNIELKV 119>XP_006711716 Length = 2411 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 111 YKRNIELKV 119>XP_006711715 Length = 2428 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 45 YKRNIELKV 53>XP_006711714 Length = 2429 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 45 YKRNIELKV 53>XP_006711713 Length = 2432 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 48 YKRNIELKV 56>XP_006711710 Length = 2494 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 111 YKRNIELKV 119>XP_006711709 Length = 2495 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKRNIVLKV 9 YKRNI LKV Sbjct: 111 YKRNIELKV 119>NP_060719 Length = 1893 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>NP_001258968 Length = 1663 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>NP_001011649 Length = 1814 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>XP_006717248 Length = 1664 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>XP_006717247 Length = 1670 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>XP_006717246 Length = 1820 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>XP_006717245 Length = 1861 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>XP_006717244 Length = 1867 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 100 YKTNIELKV 108>XP_006717243 Length = 1889 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 90 YKTNIELKV 98>XP_006717242 Length = 1898 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 YKRNIVLKV 9 YK NI LKV Sbjct: 99 YKTNIELKV 107>NP_004953 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RN+VLKV Sbjct: 460 RNVVLKV 466>XP_006717825 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RN+VLKV Sbjct: 459 RNVVLKV 465>NP_001124295 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKRNIVLKV 9 +KR++VLK+ Sbjct: 1290 FKRSMVLKL 1298>NP_001370 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKRNIVLKV 9 +KR++VLK+ Sbjct: 1274 FKRSMVLKL 1282>NP_055693 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YKRNIVLK 8 Y RNIV K Sbjct: 214 YSRNIVKK 221>XP_006723127 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YKRNIVL 7 YKRN+++ Sbjct: 628 YKRNLIV 634>XP_006722744 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKRNIVLKV 9 +KR++VLK+ Sbjct: 1153 FKRSMVLKL 1161>NP_689816 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YKRNIVL 7 YKRN+++ Sbjct: 597 YKRNLIV 603>NP_000811 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RN+V+KV Sbjct: 389 RNLVIKV 395>NP_001137417 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RN+V+KV Sbjct: 116 RNLVIKV 122>NP_001137418 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RN+V+KV Sbjct: 90 RNLVIKV 96>NP_001276081 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRNIVL 7 Y RNI+L Sbjct: 134 YPRNIIL 140>NP_001170990 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRNIVL 7 Y RNI+L Sbjct: 231 YPRNIIL 237>NP_001276082 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRNIVL 7 Y RNI+L Sbjct: 134 YPRNIIL 140>NP_001276083 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRNIVL 7 Y RNI+L Sbjct: 93 YPRNIIL 99>NP_775966 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KRNIVLK 8 K+NI+LK Sbjct: 7 KQNIILK 13>NP_056386 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RNI+LK+ Sbjct: 1072 RNIILKL 1078>NP_055907 Length = 3661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KRNIVLK 8 +RN+VLK Sbjct: 3285 RRNLVLK 3291>NP_001192 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 +N+VLKV Sbjct: 454 KNVVLKV 460>XP_005255242 Length = 3609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KRNIVLK 8 +RN+VLK Sbjct: 3233 RRNLVLK 3239>XP_005255241 Length = 3637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KRNIVLK 8 +RN+VLK Sbjct: 3261 RRNLVLK 3267>XP_005255240 Length = 3663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KRNIVLK 8 +RN+VLK Sbjct: 3287 RRNLVLK 3293>XP_005255239 Length = 3689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KRNIVLK 8 +RN+VLK Sbjct: 3313 RRNLVLK 3319>XP_006715520 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RNI+LK+ Sbjct: 1016 RNIILKL 1022>XP_006714354 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 +N+VLKV Sbjct: 421 KNVVLKV 427>NP_001093879 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RNIVLKV 9 RNI+LK+ Sbjct: 1065 RNIILKL 1071Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.147 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,973 Number of extensions: 743 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |