Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 175 NP_001075109 21 175 NP_079535 18 1935 NP_751898 18 1935 NP_002432 18 1935 NP_751897 18 1935 NP_001186346 17 3301 XP_006725396 17 3301 XP_006725395 17 3301 XP_006725393 17 3301 XP_006722057 17 3301 XP_006722056 17 3301 XP_006722054 17 3301 NP_001420 16 5631 NP_004371 16 5631 NP_001073315 16 5631 XP_006724228 16 5631 XP_005255182 16 5631 XP_006720911 16 5631 XP_005255181 16 5631 NP_000254 16 7355 NP_001148 16 7355 NP_665875 16 7355 NP_001265336 16 7355 NP_001265337 16 7355 NP_001265338 16 7355 NP_665876 16 7355 XP_006717877 16 7355 XP_006717876 16 7355 XP_005269799 16 7355 XP_005269798 16 7355 NP_001019833 15 9605 NP_000961 15 9605 NP_055289 15 9605 NP_001009568 15 9605 XP_006719612 15 9605 XP_006719611 15 9605 XP_006719610 15 9605 XP_006719609 15 9605>NP_008835 Length = 4128 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKRMYAALG 9 Y+RMYAALG Sbjct: 3610 YERMYAALG 3618Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YK +YAA Sbjct: 2312 YKEVYAA 2318>NP_001075109 Length = 4097 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKRMYAALG 9 Y+RMYAALG Sbjct: 3610 YERMYAALG 3618Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YK +YAA Sbjct: 2312 YKEVYAA 2318>NP_079535 Length = 822 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YKRMYAALG 9 YK +Y+ALG Sbjct: 354 YKTVYSALG 362>NP_751898 Length = 834 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YKRMYAALG 9 YK +Y+ALG Sbjct: 337 YKTVYSALG 345>NP_002432 Length = 834 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YKRMYAALG 9 YK +Y+ALG Sbjct: 337 YKTVYSALG 345>NP_751897 Length = 835 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YKRMYAALG 9 YK +Y+ALG Sbjct: 337 YKTVYSALG 345>NP_001186346 Length = 1491 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006725396 Length = 1144 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006725395 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006725393 Length = 1473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 697 WKRVYAAL 704>XP_006722057 Length = 1144 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006722056 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006722054 Length = 1473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 YKRMYAAL 8 +KR+YAAL Sbjct: 697 WKRVYAAL 704>NP_001420 Length = 2414 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 465 ERAYAALG 472>NP_004371 Length = 2442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 482 QRAYAALG 489>NP_001073315 Length = 2404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 444 QRAYAALG 451>XP_006724228 Length = 2388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 465 ERAYAALG 472>XP_005255182 Length = 2303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 482 QRAYAALG 489>XP_006720911 Length = 2355 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 482 QRAYAALG 489>XP_005255181 Length = 2427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KRMYAALG 9 +R YAALG Sbjct: 482 QRAYAALG 489>NP_000254 Length = 743 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKRMYAALG 9 ++R+Y ALG Sbjct: 175 WQRVYLALG 183>NP_001148 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>NP_665875 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>NP_001265336 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>NP_001265337 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>NP_001265338 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 440 YKRMY 444>NP_665876 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>XP_006717877 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>XP_006717876 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>XP_005269799 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 473 YKRMY 477>XP_005269798 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 YKRMY 5 YKRMY Sbjct: 573 YKRMY 577>NP_001019833 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YKR Y+A Sbjct: 69 YKRKYSA 75>NP_000961 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YKR Y+A Sbjct: 69 YKRKYSA 75>NP_055289 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMYAALG 9 ++YAALG Sbjct: 127 KVYAALG 133>NP_001009568 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RMYAALG 9 ++YAALG Sbjct: 127 KVYAALG 133>XP_006719612 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YKR Y+A Sbjct: 69 YKRKYSA 75>XP_006719611 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YKR Y+A Sbjct: 69 YKRKYSA 75>XP_006719610 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YKR Y+A Sbjct: 69 YKRKYSA 75>XP_006719609 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKRMYAA 7 YKR Y+A Sbjct: 69 YKRKYSA 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.140 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,035 Number of extensions: 685 Number of successful extensions: 41 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |