Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_789765                                                              19     665
NP_001123914                                                           19     665
NP_005334                                                              19     665
NP_004976                                                              19     665
NP_203524                                                              19     665
NP_002515                                                              19     665
XP_006725199                                                           19     665
XP_006719132                                                           19     665
XP_006718280                                                           19     665
NP_001078518                                                           18    1935
NP_036351                                                              18    1935
NP_001239019                                                           18    1935
XP_005247286                                                           18    1935
XP_005247285                                                           18    1935
NP_056279                                                              17    2528
NP_853510                                                              17    2528
NP_001164434                                                           17    3301
NP_001238851                                                           17    3301
NP_001238847                                                           17    3301
NP_001238846                                                           17    3301
NP_056461                                                              17    3301
NP_001238850                                                           17    3301
NP_001010942                                                           17    3301
NP_001004127                                                           17    3301
NP_001243750                                                           17    3301
NP_008843                                                              17    3301
NP_991402                                                              17    3301
XP_006710866                                                           17    3301
NP_001010935                                                           17    3301
NP_002875                                                              17    3301
NP_036382                                                              17    4312
NP_071732                                                              16    5631
NP_055125                                                              16    5631
NP_001136408                                                           16    5631
NP_631918                                                              16    5631
NP_002283                                                              16    5631
XP_005261500                                                           16    5631
XP_005261499                                                           16    5631
XP_005261498                                                           16    5631
XP_005265184                                                           16    5631
NP_038347                                                              16    7355
NP_001275762                                                           16    7355
NP_056194                                                              16    7355
NP_001152963                                                           16    7355
NP_002877                                                              16    7355
NP_000659                                                              16    7355
NP_640337                                                              16    7355
NP_001121187                                                           16    7355
NP_001259006                                                           16    7355
NP_067006                                                              16    7355
NP_001258115                                                           16    7355
NP_002921                                                              16    7355
NP_006261                                                              16    7355
NP_071411                                                              16    7355
NP_001157994                                                           16    7355
NP_000658                                                              16    7355
NP_006746                                                              16    7355
NP_060114                                                              16    7355
XP_006724460                                                           16    7355
XP_005250309                                                           16    7355
XP_005250308                                                           16    7355
XP_006715402                                                           16    7355
XP_005247613                                                           16    7355
XP_005247612                                                           16    7355
XP_006713737                                                           16    7355
XP_005247611                                                           16    7355
XP_005247610                                                           16    7355
XP_005247609                                                           16    7355
XP_006711351                                                           16    7355
NP_796377                                                              16    7355
NP_066361                                                              16    7355
NP_038265                                                              16    7355
NP_001077088                                                           16    7355
NP_000817                                                              16    7355
NP_001077089                                                           16    7355
NP_000098                                                              15    9605
NP_065433                                                              15    9605
NP_000099                                                              15    9605
NP_001027559                                                           15    9605
NP_001276680                                                           15    9605
NP_001276679                                                           15    9605
NP_001027558                                                           15    9605
NP_000447                                                              15    9605
NP_001103224                                                           15    9605
NP_001276681                                                           15    9605
NP_659502                                                              15    9605
NP_115823                                                              15    9605
NP_001034637                                                           15    9605
XP_006722988                                                           15    9605
XP_005269169                                                           15    9605
XP_006719593                                                           15    9605
XP_006719591                                                           15    9605
XP_005252865                                                           15    9605
XP_006718224                                                           15    9605
>NP_789765
          Length = 170

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>NP_001123914
          Length = 189

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>NP_005334
          Length = 189

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>NP_004976
          Length = 188

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>NP_203524
          Length = 189

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>NP_002515
          Length = 189

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>XP_006725199
          Length = 170

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>XP_006719132
          Length = 189

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>XP_006718280
          Length = 170

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVVVGA
Sbjct: 4  YKLVVVGA 11
>NP_001078518
          Length = 208

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          YKLVVVG
Sbjct: 14 YKLVVVG 20
>NP_036351
          Length = 208

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          YKLVVVG
Sbjct: 14 YKLVVVG 20
>NP_001239019
          Length = 208

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          YKLVVVG
Sbjct: 14 YKLVVVG 20
>XP_005247286
          Length = 170

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          YKLVVVG
Sbjct: 14 YKLVVVG 20
>XP_005247285
          Length = 208

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          YKLVVVG
Sbjct: 14 YKLVVVG 20
>NP_056279
          Length = 206

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   YKLVVVGAC 9
           YK+ VV AC
Sbjct: 155 YKITVVTAC 163
>NP_853510
          Length = 233

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  YKLVVVGA 8
          YK VVVGA
Sbjct: 42 YKAVVVGA 49
>NP_001164434
          Length = 242

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KLVVVGAC 9
           KLVV G C
Sbjct: 218 KLVVAGGC 225
>NP_001238851
          Length = 137

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_001238847
          Length = 142

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_001238846
          Length = 142

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_056461
          Length = 184

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_001238850
          Length = 165

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_001010942
          Length = 184

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_001004127
          Length = 492

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KLVVVGAC 9
           KLV++G C
Sbjct: 338 KLVLIGGC 345
>NP_001243750
          Length = 236

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLV++GA
Sbjct: 39 YKLVMLGA 46
>NP_008843
          Length = 219

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLV++GA
Sbjct: 22 YKLVMLGA 29
>NP_991402
          Length = 242

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   KLVVVGAC 9
           KLVV G C
Sbjct: 218 KLVVAGGC 225
>XP_006710866
          Length = 184

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_001010935
          Length = 184

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_002875
          Length = 184

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YKLVV+G+
Sbjct: 4  YKLVVLGS 11
>NP_036382
          Length = 204

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          Y+LVVVG
Sbjct: 15 YRLVVVG 21
>NP_071732
          Length = 211

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          YKL+V+G
Sbjct: 10 YKLLVIG 16
>NP_055125
          Length = 266

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          Y++VV+GA
Sbjct: 20 YRMVVLGA 27
>NP_001136408
          Length = 543

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   YKLVVVG 7
           Y+LV+VG
Sbjct: 306 YRLVIVG 312
>NP_631918
          Length = 672

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   YKLVVVG 7
           Y+LV+VG
Sbjct: 435 YRLVIVG 441
>NP_002283
          Length = 1798

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   YKLVVVGAC 9
           Y+LVV G C
Sbjct: 275 YELVVRGNC 283
>XP_005261500
          Length = 266

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          Y++VV+GA
Sbjct: 20 YRMVVLGA 27
>XP_005261499
          Length = 266

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          Y++VV+GA
Sbjct: 20 YRMVVLGA 27
>XP_005261498
          Length = 278

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          Y++VV+GA
Sbjct: 32 YRMVVLGA 39
>XP_005265184
          Length = 1798

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   YKLVVVGAC 9
           Y+LVV G C
Sbjct: 275 YELVVRGNC 283
>NP_038347
          Length = 569

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          LV+VG C
Sbjct: 17 LVIVGLC 23
>NP_001275762
          Length = 569

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          LV+VG C
Sbjct: 17 LVIVGLC 23
>NP_056194
          Length = 125

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          +VVVG C
Sbjct: 72 IVVVGGC 78
>NP_001152963
          Length = 98

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          +VVVG C
Sbjct: 72 IVVVGGC 78
>NP_002877
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YK+VV+G+
Sbjct: 4  YKVVVLGS 11
>NP_000659
          Length = 375

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  KLVVVGAC 9
          K+V VG C
Sbjct: 40 KMVAVGIC 47
>NP_640337
          Length = 1115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   YKLVVVGAC 9
           Y LVV G C
Sbjct: 641 YGLVVFGNC 649
>NP_001121187
          Length = 1151

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   YKLVVVGAC 9
           Y LVV G C
Sbjct: 641 YGLVVFGNC 649
>NP_001259006
          Length = 153

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YK+V++GA
Sbjct: 21 YKVVMLGA 28
>NP_067006
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YK+VV+G+
Sbjct: 4  YKVVVLGS 11
>NP_001258115
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YK+VV+G+
Sbjct: 4  YKVVVLGS 11
>NP_002921
          Length = 217

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YK+V++GA
Sbjct: 21 YKVVMLGA 28
>NP_006261
          Length = 218

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  YKLVVVG 7
          +KLVVVG
Sbjct: 30 HKLVVVG 36
>NP_071411
          Length = 322

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  LVVVGAC 9
          +VVVG+C
Sbjct: 18 VVVVGSC 24
>NP_001157994
          Length = 199

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  KLVVVGA 8
          KL++VGA
Sbjct: 10 KLIIVGA 16
>NP_000658
          Length = 375

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  KLVVVGAC 9
          K+V VG C
Sbjct: 40 KMVAVGIC 47
>NP_006746
          Length = 337

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YKLVVVGA 8
           YK +V+GA
Sbjct: 229 YKTIVMGA 236
>NP_060114
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_006724460
          Length = 574

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          LV+VG C
Sbjct: 17 LVIVGLC 23
>XP_005250309
          Length = 105

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          +VVVG C
Sbjct: 72 IVVVGGC 78
>XP_005250308
          Length = 105

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          +VVVG C
Sbjct: 72 IVVVGGC 78
>XP_006715402
          Length = 1135

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   YKLVVVGAC 9
           Y LVV G C
Sbjct: 641 YGLVVFGNC 649
>XP_005247613
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_005247612
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_006713737
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_005247611
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_005247610
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_005247609
          Length = 600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VVVG C
Sbjct: 315 IVVVGGC 321
>XP_006711351
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  KLVVVGA 8
          KL++VGA
Sbjct: 10 KLIIVGA 16
>NP_796377
          Length = 199

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  KLVVVGA 8
          KL++VGA
Sbjct: 10 KLIIVGA 16
>NP_066361
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  YKLVVVGA 8
          YK+VV+G+
Sbjct: 4  YKVVVLGS 11
>NP_038265
          Length = 569

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LVVVGAC 9
          LV+VG C
Sbjct: 17 LVIVGLC 23
>NP_001077088
          Length = 883

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YKLVVVG 7
           YKL +VG
Sbjct: 461 YKLTIVG 467
>NP_000817
          Length = 883

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YKLVVVG 7
           YKL +VG
Sbjct: 461 YKLTIVG 467
>NP_001077089
          Length = 836

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YKLVVVG 7
           YKL +VG
Sbjct: 414 YKLTIVG 420
>NP_000098
          Length = 427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YKLVVVG 7
           Y L+VVG
Sbjct: 348 YNLIVVG 354
>NP_065433
          Length = 1091

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3  LVVVGAC 9
          L+V+G+C
Sbjct: 52 LIVMGSC 58
>NP_000099
          Length = 509

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KLVVVGA 8
           K+VV+GA
Sbjct: 215 KMVVIGA 221
>NP_001027559
          Length = 545

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   YKLVVVGA 8
           Y+L VVGA
Sbjct: 230 YRLHVVGA 237
>NP_001276680
          Length = 486

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KLVVVGA 8
           K+VV+GA
Sbjct: 192 KMVVIGA 198
>NP_001276679
          Length = 410

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KLVVVGA 8
           K+VV+GA
Sbjct: 116 KMVVIGA 122
>NP_001027558
          Length = 545

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   YKLVVVGA 8
           Y+L VVGA
Sbjct: 230 YRLHVVGA 237
>NP_000447
          Length = 545

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   YKLVVVGA 8
           Y+L VVGA
Sbjct: 230 YRLHVVGA 237
>NP_001103224
          Length = 2215

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  VVVGAC 9
          VVVG+C
Sbjct: 38 VVVGSC 43
>NP_001276681
          Length = 461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   KLVVVGA 8
           K+VV+GA
Sbjct: 167 KMVVIGA 173
>NP_659502
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2  KLVVVGAC 9
          +L+V+G C
Sbjct: 46 ELIVLGCC 53
>NP_115823
          Length = 2809

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    YKLVVVGAC 9
            YKL   GAC
Sbjct: 1795 YKLSPGGAC 1803
>NP_001034637
          Length = 583

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   LVVVGAC 9
           +VV+G C
Sbjct: 302 IVVIGGC 308
>XP_006722988
          Length = 2818

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    YKLVVVGAC 9
            YKL   GAC
Sbjct: 1804 YKLSPGGAC 1812
>XP_005269169
          Length = 552

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   YKLVVVGA 8
           Y+L VVGA
Sbjct: 237 YRLHVVGA 244
>XP_006719593
          Length = 1304

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  VVVGAC 9
          VVVG+C
Sbjct: 38 VVVGSC 43
>XP_006719591
          Length = 2230

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  VVVGAC 9
          VVVG+C
Sbjct: 38 VVVGSC 43
>XP_005252865
          Length = 238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YKLVVVG 7
           Y L+VVG
Sbjct: 159 YNLIVVG 165
>XP_006718224
          Length = 427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   YKLVVVG 7
           Y L+VVG
Sbjct: 348 YNLIVVG 354
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.335    0.148    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 405,036
Number of extensions: 937
Number of successful extensions: 94
Number of sequences better than 10000.0: 94
Number of HSP's gapped: 94
Number of HSP's successfully gapped: 94
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.3 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package