Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_006198 16 5631 NP_001167554 16 5631 NP_001167553 16 5631 NP_060322 16 5631 NP_000360 16 5631 NP_001167552 16 5631 XP_005268094 16 5631 NP_976249 16 7355 NP_001128302 15 9605 NP_060121 15 9605 NP_001128303 15 9605 NP_001128304 15 9605 NP_071406 15 9605 NP_775182 15 9605 NP_055726 15 9605 NP_001158221 15 9605 NP_001159365 15 9605 NP_000048 15 9605 NP_001274177 15 9605 NP_001274176 15 9605 NP_001274175 15 9605 NP_060015 15 9605 XP_006720695 15 9605 XP_005268050 15 9605 XP_005268049 15 9605 XP_005268048 15 9605 XP_005267096 15 9605 XP_006715570 15 9605 XP_005246685 15 9605 XP_005246683 15 9605 NP_009007 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YKLL ITVR Sbjct: 667 YKLLSITVR 675>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YKLL ITVR Sbjct: 667 YKLLSITVR 675>NP_006198 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKLLYITV 8 Y+LLY+ V Sbjct: 260 YQLLYVAV 267>NP_001167554 Length = 1039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLYITVR 9 KLLY T+R Sbjct: 806 KLLYTTLR 813>NP_001167553 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLYITVR 9 KLLY T+R Sbjct: 807 KLLYTTLR 814>NP_060322 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLYITVR 9 KLLY T+R Sbjct: 829 KLLYTTLR 836>NP_000360 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YKLLYITVR 9 Y +YITVR Sbjct: 601 YVKIYITVR 609>NP_001167552 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLYITVR 9 KLLY T+R Sbjct: 829 KLLYTTLR 836>XP_005268094 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YKLLYITVR 9 Y +YITVR Sbjct: 601 YVKIYITVR 609>NP_976249 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 Y+LL +T+R Sbjct: 187 YELLALTIR 195>NP_001128302 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LYITVR 9 LY+TVR Sbjct: 530 LYVTVR 535>NP_060121 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LYITVR 9 LY+TVR Sbjct: 530 LYVTVR 535>NP_001128303 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LYITVR 9 LY+TVR Sbjct: 530 LYVTVR 535>NP_001128304 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LYITVR 9 LY+TVR Sbjct: 530 LYVTVR 535>NP_071406 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 251 YKVIHITGR 259>NP_775182 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 270 YKVIHITGR 278>NP_055726 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKLLYITV 8 YKL Y T+ Sbjct: 253 YKLCYFTL 260>NP_001158221 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 283 YKVIHITGR 291>NP_001159365 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 253 YKVIHITGR 261>NP_000048 Length = 1417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLLYIT 7 KLLY+T Sbjct: 761 KLLYVT 766>NP_001274177 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLLYIT 7 KLLY+T Sbjct: 386 KLLYVT 391>NP_001274176 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLLYIT 7 KLLY+T Sbjct: 761 KLLYVT 766>NP_001274175 Length = 1417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLLYIT 7 KLLY+T Sbjct: 761 KLLYVT 766>NP_060015 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YKLLYITV 8 YK +++TV Sbjct: 152 YKAIFVTV 159>XP_006720695 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLLYIT 7 KLLY+T Sbjct: 107 KLLYVT 112>XP_005268050 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 270 YKVIHITGR 278>XP_005268049 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 288 YKVIHITGR 296>XP_005268048 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKLLYITVR 9 YK+++IT R Sbjct: 290 YKVIHITGR 298>XP_005267096 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LYITVR 9 LY+TVR Sbjct: 530 LYVTVR 535>XP_006715570 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LYITVR 9 LY+TVR Sbjct: 530 LYVTVR 535>XP_005246685 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKLLYITV 8 Y+LL ITV Sbjct: 4 YRLLSITV 11>XP_005246683 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKLLYITV 8 Y+LL ITV Sbjct: 4 YRLLSITV 11>NP_009007 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKLLYI 6 YKL+YI Sbjct: 357 YKLVYI 362Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.155 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,778 Number of extensions: 578 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |