Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 22 134 XP_006714104 22 134 XP_005265800 22 134 XP_006714103 22 134 XP_006714102 22 134 NP_722520 18 1935 NP_001171616 17 4312 NP_001171617 17 4312 NP_001158146 17 4312 NP_877437 17 4312 NP_001158147 17 4312 NP_849144 17 4312 XP_006713663 17 4312 XP_006713660 17 4312 XP_005247434 17 4312 XP_006713659 17 4312 NP_055872 16 5631 NP_003787 16 5631 NP_001239570 16 5631 XP_005259420 16 5631 XP_005259419 16 5631 XP_006719852 16 5631 XP_005266357 16 5631 XP_006719851 16 5631 XP_006719850 16 5631 XP_006719849 16 5631 XP_006719848 16 5631 XP_005266356 16 5631 XP_006719847 16 5631 XP_006719846 16 5631 XP_006719845 16 5631 XP_006719844 16 5631 XP_006719843 16 5631 XP_006719842 16 5631 XP_006714837 16 7355 NP_001166902 15 9605 NP_056126 15 9605 NP_001166879 15 9605 NP_060396 15 9605 NP_056243 15 9605 NP_001006657 15 9605 NP_060442 15 9605 XP_006720255 15 9605 XP_006720254 15 9605 XP_005246484 15 9605 XP_005246482 15 9605 XP_005246481 15 9605 XP_006712450 15 9605 XP_005246480 15 9605 XP_006712449 15 9605 XP_005246478 15 9605>NP_006197 Length = 1089 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKCAARQAT 9 Y+CAARQAT Sbjct: 288 YECAARQAT 296>XP_006714104 Length = 832 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKCAARQAT 9 Y+CAARQAT Sbjct: 313 YECAARQAT 321>XP_005265800 Length = 1089 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKCAARQAT 9 Y+CAARQAT Sbjct: 288 YECAARQAT 296>XP_006714103 Length = 1111 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKCAARQAT 9 Y+CAARQAT Sbjct: 310 YECAARQAT 318>XP_006714102 Length = 1114 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YKCAARQAT 9 Y+CAARQAT Sbjct: 313 YECAARQAT 321>NP_722520 Length = 1006 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YKCAARQAT 9 Y CA+RQ T Sbjct: 262 YYCASRQGT 270>NP_001171616 Length = 650 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 436 YRCAAR 441>NP_001171617 Length = 602 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 388 YRCAAR 393>NP_001158146 Length = 349 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 319 YRCAAR 324>NP_877437 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 344 YRCAAR 349>NP_001158147 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 324 YRCAAR 329>NP_849144 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 2409 YRCAAR 2414>XP_006713663 Length = 602 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 388 YRCAAR 393>XP_006713660 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 2409 YRCAAR 2414>XP_005247434 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 2409 YRCAAR 2414>XP_006713659 Length = 2695 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YKCAAR 6 Y+CAAR Sbjct: 2481 YRCAAR 2486>NP_055872 Length = 4678 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>NP_003787 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KCAARQA 8 KC+A+QA Sbjct: 107 KCSAKQA 113>NP_001239570 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KCAARQA 8 KC+A+QA Sbjct: 89 KCSAKQA 95>XP_005259420 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KCAARQA 8 KC+A+QA Sbjct: 107 KCSAKQA 113>XP_005259419 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KCAARQA 8 KC+A+QA Sbjct: 89 KCSAKQA 95>XP_006719852 Length = 4752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_005266357 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719851 Length = 4689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719850 Length = 4697 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719849 Length = 4703 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719848 Length = 4737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_005266356 Length = 4755 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719847 Length = 4761 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1271 YDCAARE 1277>XP_006719846 Length = 4763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719845 Length = 4772 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719844 Length = 4789 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719843 Length = 4794 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006719842 Length = 4797 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YKCAARQ 7 Y CAAR+ Sbjct: 1307 YDCAARE 1313>XP_006714837 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KCAARQAT 9 KC+ QAT Sbjct: 600 KCSCNQAT 607>NP_001166902 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>NP_056126 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>NP_001166879 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>NP_060396 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CAARQA 8 C+ARQA Sbjct: 395 CSARQA 400>NP_056243 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKCAARQAT 9 Y+C+ QAT Sbjct: 347 YECSKCQAT 355>NP_001006657 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YKCAARQAT 9 Y+C+ QAT Sbjct: 347 YECSKCQAT 355>NP_060442 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CAARQA 8 C+ARQA Sbjct: 390 CSARQA 395>XP_006720255 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CAARQA 8 C+ARQA Sbjct: 395 CSARQA 400>XP_006720254 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CAARQA 8 C+ARQA Sbjct: 390 CSARQA 395>XP_005246484 Length = 1359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>XP_005246482 Length = 1724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>XP_005246481 Length = 1804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>XP_006712450 Length = 1816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>XP_005246480 Length = 1816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>XP_006712449 Length = 1908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324>XP_005246478 Length = 1908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YKCAARQA 8 Y CAAR + Sbjct: 317 YVCAARNS 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.118 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,077 Number of extensions: 403 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |