Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 665 NP_005913 19 665 XP_005267046 19 665 XP_005267045 19 665 NP_877949 17 4312 NP_000924 17 4312 NP_001166117 17 4312 NP_115502 17 4312 NP_001164194 17 4312 NP_588614 17 4312 NP_001164193 17 4312 NP_001164195 17 4312 NP_001137359 17 4312 NP_004227 17 4312 XP_006723635 17 4312 XP_006723634 17 4312 XP_006723633 17 4312 XP_005260781 17 4312 XP_006723632 17 4312 XP_006723631 17 4312 NP_000611 16 5631 NP_001191147 16 5631 NP_001191142 16 5631 NP_001191143 16 5631 XP_006719491 16 5631 XP_006719490 16 5631 XP_006719489 16 5631 NP_001121904 16 7355 NP_001264154 16 7355 NP_066024 16 7355 NP_006764 16 7355 NP_060150 16 7355 NP_000127 15 9605 NP_001230672 15 9605 NP_001230673 15 9605 NP_003959 15 9605 NP_060341 15 9605 NP_937838 15 9605 NP_001243391 15 9605 NP_001243389 15 9605 NP_001243392 15 9605 NP_001243385 15 9605 XP_006717067 15 9605 XP_006717066 15 9605 XP_006717065 15 9605 XP_006717064 15 9605 XP_005244820 15 9605>NP_006715 Length = 1558 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 KALKQMGL Sbjct: 532 KALKQMGL 539>NP_005913 Length = 1608 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 KALKQMGL Sbjct: 532 KALKQMGL 539>XP_005267046 Length = 1554 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 KALKQMGL Sbjct: 532 KALKQMGL 539>XP_005267045 Length = 1604 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 KALKQMGL Sbjct: 532 KALKQMGL 539>NP_877949 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>NP_000924 Length = 1194 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>NP_001166117 Length = 1187 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>NP_115502 Length = 233 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 YKA+KQ G Sbjct: 34 YKAVKQEG 41>NP_001164194 Length = 212 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 YKA+KQ G Sbjct: 34 YKAVKQEG 41>NP_588614 Length = 789 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK+MGL Sbjct: 49 RALKKMGL 56>NP_001164193 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 YKA+KQ G Sbjct: 42 YKAVKQEG 49>NP_001164195 Length = 207 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 YKA+KQ G Sbjct: 34 YKAVKQEG 41>NP_001137359 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 +KALKQM Sbjct: 69 FKALKQM 75>NP_004227 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 +KALKQM Sbjct: 69 FKALKQM 75>XP_006723635 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>XP_006723634 Length = 1187 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>XP_006723633 Length = 1194 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>XP_005260781 Length = 1206 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>XP_006723632 Length = 1206 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>XP_006723631 Length = 1206 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YKALKQMGL 9 ++ALK++GL Sbjct: 183 FQALKELGL 191>NP_000611 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1341 YRALKEQG 1348>NP_001191147 Length = 1468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1375 YRALKEQG 1382>NP_001191142 Length = 1098 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1005 YRALKEQG 1012>NP_001191143 Length = 1098 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1005 YRALKEQG 1012>XP_006719491 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1341 YRALKEQG 1348>XP_006719490 Length = 1468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1375 YRALKEQG 1382>XP_006719489 Length = 1468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YKALKQMG 8 Y+ALK+ G Sbjct: 1375 YRALKEQG 1382>NP_001121904 Length = 162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALKQMGL 9 K +KQ+GL Sbjct: 64 KCIKQLGL 71>NP_001264154 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALKQMGL 9 K +KQ+GL Sbjct: 65 KCIKQLGL 72>NP_066024 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALKQMGL 9 K +KQ+GL Sbjct: 64 KCIKQLGL 71>NP_006764 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KALKQMG 8 KA+K+MG Sbjct: 192 KAIKEMG 198>NP_060150 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YKALKQMGL 9 YK L+++GL Sbjct: 263 YKELQRLGL 271>NP_000127 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>NP_001230672 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>NP_001230673 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>NP_003959 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALKQMGL 9 K LK++GL Sbjct: 431 KTLKELGL 438>NP_060341 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK++GL Sbjct: 497 QALKELGL 504>NP_937838 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KALKQMGL 9 K LK++GL Sbjct: 417 KTLKELGL 424>NP_001243391 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK++GL Sbjct: 399 QALKELGL 406>NP_001243389 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK++GL Sbjct: 468 QALKELGL 475>NP_001243392 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK++GL Sbjct: 396 QALKELGL 403>NP_001243385 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK++GL Sbjct: 503 QALKELGL 510>XP_006717067 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>XP_006717066 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>XP_006717065 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>XP_006717064 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YKALKQM 7 Y+ALK+M Sbjct: 49 YEALKEM 55>XP_005244820 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KALKQMGL 9 +ALK++GL Sbjct: 399 QALKELGL 406Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.137 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,943 Number of extensions: 814 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |