Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 299 NP_002600 20 299 XP_005268521 20 299 XP_006714104 20 299 XP_005265800 20 299 XP_006714103 20 299 XP_006714102 20 299 NP_877439 18 1935 NP_694999 17 2528 NP_689829 17 3301 NP_001258941 17 3301 NP_060661 17 3301 NP_203755 17 3301 NP_001258942 17 3301 XP_006719906 17 3301 XP_005266498 17 3301 XP_005270314 17 3301 XP_006713671 17 3301 NP_008864 16 7355 NP_000334 16 7355 NP_001243243 16 7355 NP_037423 16 7355 NP_055042 16 7355 XP_006724371 16 7355 XP_006716613 16 7355 XP_006716612 16 7355 XP_006716611 16 7355 NP_056289 15 9605 NP_149091 15 9605 NP_001269378 15 9605 NP_001165442 15 9605 NP_056646 15 9605 NP_000656 15 9605 NP_001452 15 9605 XP_005260441 15 9605 XP_005250415 15 9605 XP_006716058 15 9605 XP_005250414 15 9605 XP_006716057 15 9605 XP_005273004 15 9605 XP_005273005 15 9605 XP_005273003 15 9605>NP_006197 Length = 1089 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 572 YIYVDPMQL 580>NP_002600 Length = 1106 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 579 YIYVDPMQL 587>XP_005268521 Length = 1042 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 515 YIYVDPMQL 523>XP_006714104 Length = 832 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 597 YIYVDPMQL 605>XP_005265800 Length = 1089 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 572 YIYVDPMQL 580>XP_006714103 Length = 1111 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 594 YIYVDPMQL 602>XP_006714102 Length = 1114 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIYVD MQL Sbjct: 597 YIYVDPMQL 605>NP_877439 Length = 852 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 YIY DT+Q+ Sbjct: 327 YIYKDTIQV 335>NP_694999 Length = 686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YIYVDT 6 YIYVDT Sbjct: 52 YIYVDT 57>NP_689829 Length = 723 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 Y+YV TM++ Sbjct: 412 YVYVTTMKV 420>NP_001258941 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYVDTMQL 9 +Y+DTMQ+ Sbjct: 293 LYLDTMQV 300>NP_060661 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YIYVDTMQL 9 Y+Y DT+ L Sbjct: 427 YLYTDTVDL 435>NP_203755 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYVDTMQL 9 +Y+DTMQ+ Sbjct: 293 LYLDTMQV 300>NP_001258942 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYVDTMQL 9 +Y+DTMQ+ Sbjct: 293 LYLDTMQV 300>XP_006719906 Length = 338 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YIYVDTMQL 9 Y+Y DT+ L Sbjct: 234 YLYTDTVDL 242>XP_005266498 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YIYVDTMQL 9 Y+Y DT+ L Sbjct: 427 YLYTDTVDL 435>XP_005270314 Length = 552 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYVDTMQL 9 +Y+DTMQ+ Sbjct: 298 LYLDTMQV 305>XP_006713671 Length = 576 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YIYVDTMQL 9 Y+YV TM++ Sbjct: 265 YVYVTTMKV 273>NP_008864 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYVDTMQ 8 IY DT+Q Sbjct: 182 IYTDTLQ 188>NP_000334 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYVDTMQ 8 IY DT+Q Sbjct: 201 IYTDTLQ 207>NP_001243243 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYVDTMQ 8 IY DT+Q Sbjct: 74 IYTDTLQ 80>NP_037423 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YIYVDTMQ 8 Y+Y+ TM+ Sbjct: 1407 YLYLSTME 1414>NP_055042 Length = 659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYVDTMQ 8 IY DT+Q Sbjct: 201 IYTDTLQ 207>XP_006724371 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 IYVDTMQ 8 IY DT+Q Sbjct: 155 IYTDTLQ 161>XP_006716613 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YIYVDTMQ 8 Y+Y+ TM+ Sbjct: 749 YLYLSTME 756>XP_006716612 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YIYVDTMQ 8 Y+Y+ TM+ Sbjct: 1329 YLYLSTME 1336>XP_006716611 Length = 1440 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YIYVDTMQ 8 Y+Y+ TM+ Sbjct: 1404 YLYLSTME 1411>NP_056289 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYVDTMQL 9 I+VDTM++ Sbjct: 110 IHVDTMKV 117>NP_149091 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y+Y DT+ Sbjct: 254 YVYEDTL 260>NP_001269378 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 101 YQYVDTL 107>NP_001165442 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y+Y DT+ Sbjct: 254 YVYEDTL 260>NP_056646 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 101 YQYVDTL 107>NP_000656 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 101 YQYVDTL 107>NP_001452 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVDTMQ 8 Y+DTM+ Sbjct: 432 YIDTME 437>XP_005260441 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IYVDTMQL 9 I+VDTM++ Sbjct: 110 IHVDTMKV 117>XP_005250415 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 101 YQYVDTL 107>XP_006716058 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 101 YQYVDTL 107>XP_005250414 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 101 YQYVDTL 107>XP_006716057 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YIYVDTM 7 Y YVDT+ Sbjct: 168 YQYVDTL 174>XP_005273004 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVDTMQ 8 Y+DTM+ Sbjct: 432 YIDTME 437>XP_005273005 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVDTMQ 8 Y+DTM+ Sbjct: 432 YIDTME 437>XP_005273003 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YVDTMQ 8 Y+DTM+ Sbjct: 432 YIDTME 437Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.146 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 406,878 Number of extensions: 662 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |