Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_001361 17 3301 XP_006712019 17 3301 NP_620687 17 4312 NP_001136018 17 4312 NP_002772 17 4312 NP_361013 17 4312 NP_000360 17 4312 XP_005268094 17 4312 NP_001123486 17 4312 NP_057531 16 5631 XP_005249832 16 5631 XP_006715803 16 5631 XP_006715802 16 5631 XP_006715801 16 5631 NP_004925 16 7355 NP_852111 16 7355 NP_000136 16 7355 NP_001127923 16 7355 NP_001127922 16 7355 NP_056299 16 7355 NP_690877 16 7355 NP_006055 16 7355 NP_057740 16 7355 XP_005262030 16 7355 XP_006714498 16 7355 XP_005248285 16 7355 NP_997053 16 7355 NP_006561 16 7355 NP_004987 15 9605 NP_001010892 15 9605 NP_001155136 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 XP_006720948 15 9605 XP_006720947 15 9605 XP_005255386 15 9605 XP_005255385 15 9605 XP_005255384 15 9605 XP_006715532 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ITVRNAKK Sbjct: 672 ITVRNAKK 679>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ITVRNAKK Sbjct: 672 ITVRNAKK 679>NP_001361 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITVRNAK 8 IT+RNAK Sbjct: 1542 ITIRNAK 1548>XP_006712019 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ITVRNAK 8 IT+RNAK Sbjct: 1542 ITIRNAK 1548>NP_620687 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YITVRNA 7 YI+VRNA Sbjct: 785 YISVRNA 791>NP_001136018 Length = 1076 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YITVRNAKK 9 ++TVRNA K Sbjct: 917 HVTVRNAWK 925>NP_002772 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 YIT+ N+K Sbjct: 150 YITINNSK 157>NP_361013 Length = 1076 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YITVRNAKK 9 ++TVRNA K Sbjct: 917 HVTVRNAWK 925>NP_000360 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YITVRN 6 YITVRN Sbjct: 605 YITVRN 610>XP_005268094 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 YITVRN 6 YITVRN Sbjct: 605 YITVRN 610>NP_001123486 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 YIT+ N+K Sbjct: 150 YITINNSK 157>NP_057531 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 Y+T RNA+ Sbjct: 311 YLTTRNAE 318>XP_005249832 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 Y+T RNA+ Sbjct: 199 YLTTRNAE 206>XP_006715803 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 Y+T RNA+ Sbjct: 311 YLTTRNAE 318>XP_006715802 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 Y+T RNA+ Sbjct: 311 YLTTRNAE 318>XP_006715801 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YITVRNAK 8 Y+T RNA+ Sbjct: 311 YLTTRNAE 318>NP_004925 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YITVRNAKK 9 +IT+R +KK Sbjct: 633 FITLRRSKK 641>NP_852111 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YITVRN 6 Y+TVRN Sbjct: 527 YLTVRN 532>NP_000136 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YITVRN 6 Y+TVRN Sbjct: 553 YLTVRN 558>NP_001127923 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YITVRNA 7 Y+T+RNA Sbjct: 257 YMTLRNA 263>NP_001127922 Length = 435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YITVRNA 7 Y+T+RNA Sbjct: 359 YMTLRNA 365>NP_056299 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YITVRNAK 8 YI RNAK Sbjct: 210 YINERNAK 217>NP_690877 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YITVRNA 7 Y+T+RNA Sbjct: 359 YMTLRNA 365>NP_006055 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITVRNAKK 9 I +RNA+K Sbjct: 321 INIRNARK 328>NP_057740 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITVRNAKK 9 I +RNA+K Sbjct: 349 INIRNARK 356>XP_005262030 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITVRNAKK 9 I +RNA+K Sbjct: 311 INIRNARK 318>XP_006714498 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YITVRNAKK 9 +IT+R +KK Sbjct: 633 FITLRRSKK 641>XP_005248285 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YITVRNAKK 9 +IT+R +KK Sbjct: 633 FITLRRSKK 641>NP_997053 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 YITVRNAK 8 YI RNAK Sbjct: 168 YINERNAK 175>NP_006561 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITVRNAKK 9 I +RNA+K Sbjct: 288 INIRNARK 295>NP_004987 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ITVRNA 7 ITVRNA Sbjct: 644 ITVRNA 649>NP_001010892 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITVRNAK 8 IT++NAK Sbjct: 209 ITIQNAK 215>NP_001155136 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITVRNAK 8 IT++NAK Sbjct: 209 ITIQNAK 215>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 21124 LSIKNAKK 21131>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 21249 LSIKNAKK 21256>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 28548 LSIKNAKK 28555>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 27621 LSIKNAKK 27628>XP_006720948 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ITVRNA 7 ITVRNA Sbjct: 514 ITVRNA 519>XP_006720947 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ITVRNA 7 ITVRNA Sbjct: 644 ITVRNA 649>XP_005255386 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ITVRNA 7 ITVRNA Sbjct: 644 ITVRNA 649>XP_005255385 Length = 1485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ITVRNA 7 ITVRNA Sbjct: 598 ITVRNA 603>XP_005255384 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ITVRNA 7 ITVRNA Sbjct: 602 ITVRNA 607>XP_006715532 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITVRNAK 8 IT++NAK Sbjct: 209 ITIQNAK 215>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 16861 LSIKNAKK 16868>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 18220 LSIKNAKK 18227>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 28176 LSIKNAKK 28183>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 29682 LSIKNAKK 29689>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 30189 LSIKNAKK 30196>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRNAKK 9 ++++NAKK Sbjct: 21316 LSIKNAKK 21323Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.129 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 341,257 Number of extensions: 543 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |