Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 20 299 XP_006713721 20 299 NP_001005499 17 3301 NP_003801 17 3301 NP_689646 17 3301 NP_940841 17 3301 XP_006718830 17 3301 NP_940980 16 5631 NP_001139395 16 5631 NP_002477 16 5631 NP_036529 16 5631 XP_005266764 16 5631 XP_005266762 16 5631 XP_005268686 16 5631 XP_005252054 16 5631 NP_060790 16 7355 XP_006718697 16 7355 XP_006718695 16 7355 XP_006718693 16 7355 XP_006718692 16 7355 NP_114475 16 7355 NP_061742 16 7355 NP_001124388 15 9605 NP_004603 15 9605 NP_001005497 15 9605 NP_473445 15 9605 NP_940968 15 9605 NP_001276005 15 9605 NP_001276008 15 9605 NP_001029030 15 9605 NP_071932 15 9605 NP_001276006 15 9605 NP_001029029 15 9605 NP_001029027 15 9605 NP_001276007 15 9605 NP_001248322 15 9605 NP_001248319 15 9605 NP_005822 15 9605 NP_001248320 15 9605 NP_001271169 15 9605 NP_001271170 15 9605 NP_061872 15 9605 NP_001248324 15 9605 XP_005269963 15 9605 XP_005269962 15 9605 XP_005252615 15 9605 XP_006717554 15 9605 XP_005252207 15 9605>NP_006209 Length = 1068 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 YIFVSVT+E Sbjct: 68 YIFVSVTQE 76>XP_006713721 Length = 1068 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 YIFVSVT+E Sbjct: 68 YIFVSVTQE 76>NP_001005499 Length = 312 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YIFVSVTE 8 YIF+ VTE Sbjct: 102 YIFLGVTE 109>NP_003801 Length = 281 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 IFVSVT E Sbjct: 256 IFVSVTNE 263>NP_689646 Length = 612 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 YIF+ TEE Sbjct: 296 YIFIHKTEE 304>NP_940841 Length = 612 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 YIF+ TEE Sbjct: 296 YIFIHKTEE 304>XP_006718830 Length = 612 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 YIF+ TEE Sbjct: 296 YIFIHKTEE 304>NP_940980 Length = 2527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 Y FV+ TEE Sbjct: 1485 YHFVNATEE 1493>NP_001139395 Length = 1154 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YIFVSVTE 8 YIF ++TE Sbjct: 5 YIFCNITE 12>NP_002477 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FVSVTEE 9 FVSVT+E Sbjct: 152 FVSVTQE 158>NP_036529 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FVSVTEE 9 FV+VTEE Sbjct: 335 FVAVTEE 341>XP_005266764 Length = 255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FVSVTEE 9 FV+VTEE Sbjct: 199 FVAVTEE 205>XP_005266762 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FVSVTEE 9 FV+VTEE Sbjct: 344 FVAVTEE 350>XP_005268686 Length = 2521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 Y FV+ TEE Sbjct: 1485 YHFVNATEE 1493>XP_005252054 Length = 723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FVSVTEE 9 FVSVT+E Sbjct: 85 FVSVTQE 91>NP_060790 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 IFV V+EE Sbjct: 233 IFVDVSEE 240>XP_006718697 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 IFV V+EE Sbjct: 105 IFVDVSEE 112>XP_006718695 Length = 220 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 IFV V+EE Sbjct: 126 IFVDVSEE 133>XP_006718693 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 IFV V+EE Sbjct: 152 IFVDVSEE 159>XP_006718692 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 IFV V+EE Sbjct: 197 IFVDVSEE 204>NP_114475 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 Y FV +TE+ Sbjct: 279 YSFVKITEK 287>NP_061742 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YIFVSVTEE 9 Y FV +TE+ Sbjct: 279 YSFVKITEK 287>NP_001124388 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVSVTE 8 FVSVTE Sbjct: 55 FVSVTE 60>NP_004603 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVSVTE 8 FVSVTE Sbjct: 55 FVSVTE 60>NP_001005497 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YIFVSVTE 8 +IF+ VTE Sbjct: 102 FIFLGVTE 109>NP_473445 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YIFVSVTE 8 +IF+ VTE Sbjct: 101 FIFMGVTE 108>NP_940968 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YIFVSVTE 8 +IF+ +TE Sbjct: 96 HIFIDITE 103>NP_001276005 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 99 YLFTNLSEE 107>NP_001276008 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 94 YLFTNLSEE 102>NP_001029030 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 94 YLFTNLSEE 102>NP_071932 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 99 YLFTNLSEE 107>NP_001276006 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 94 YLFTNLSEE 102>NP_001029029 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 94 YLFTNLSEE 102>NP_001029027 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 214 YLFTNLSEE 222>NP_001276007 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 99 YLFTNLSEE 107>NP_001248322 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 ++F+S+TE+ Sbjct: 225 HLFLSLTEQ 233>NP_001248319 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 ++F+S+TE+ Sbjct: 291 HLFLSLTEQ 299>NP_005822 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 ++F+S+TE+ Sbjct: 267 HLFLSLTEQ 275>NP_001248320 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 ++F+S+TE+ Sbjct: 288 HLFLSLTEQ 296>NP_001271169 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 +FVS TEE Sbjct: 130 MFVSSTEE 137>NP_001271170 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 +FVS TEE Sbjct: 130 MFVSSTEE 137>NP_061872 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 +FVS TEE Sbjct: 130 MFVSSTEE 137>NP_001248324 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 YIFVSVTEE 9 ++F+S+TE+ Sbjct: 195 HLFLSLTEQ 203>XP_005269963 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 +FVS TEE Sbjct: 130 MFVSSTEE 137>XP_005269962 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IFVSVTEE 9 +FVS TEE Sbjct: 130 MFVSSTEE 137>XP_005252615 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 94 YLFTNLSEE 102>XP_006717554 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YIFVSVTEE 9 Y+F +++EE Sbjct: 99 YLFTNLSEE 107>XP_005252207 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVSVTE 8 FVSVTE Sbjct: 55 FVSVTE 60Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.136 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,758 Number of extensions: 566 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |