Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 21 175 NP_078948 17 2528 NP_037472 17 2528 XP_005263278 17 2528 XP_005263277 17 2528 NP_001265473 17 4312 NP_000057 17 4312 NP_001265472 17 4312 XP_005271223 17 4312 XP_006710936 17 4312 NP_079350 16 7355 NP_006217 16 7355 NP_872384 16 7355 NP_001092805 16 7355 NP_055574 16 7355 XP_006716479 16 7355 XP_006714380 16 7355 XP_006714379 16 7355 XP_006714378 16 7355 XP_006714377 16 7355 XP_005246701 16 7355 XP_005246700 16 7355 XP_005245152 16 7355 NP_001175 15 9605 NP_005492 15 9605 NP_002195 15 9605 NP_001265723 15 9605 NP_061325 15 9605 NP_780778 15 9605 NP_940998 15 9605 NP_001155313 15 9605 NP_005963 15 9605 NP_056127 15 9605 NP_001135392 15 9605 NP_001135391 15 9605 NP_689835 15 9605 NP_002421 15 9605 NP_001265724 15 9605 XP_005274644 15 9605 XP_005261913 15 9605 XP_005261910 15 9605 XP_005261905 15 9605 XP_006723893 15 9605 XP_005260515 15 9605 XP_006723892 15 9605 XP_006723891 15 9605 XP_006723890 15 9605 XP_005257365 15 9605 XP_005277701 15 9605 XP_006717608 15 9605 XP_005248505 15 9605 XP_006714407 15 9605 XP_006714406 15 9605 XP_006714405 15 9605 XP_005263349 15 9605 XP_005263348 15 9605 XP_005263347 15 9605 XP_005263346 15 9605 XP_005263345 15 9605 XP_005263344 15 9605 XP_005263343 15 9605 XP_005263342 15 9605 XP_005263341 15 9605 XP_005263340 15 9605 XP_005263339 15 9605 NP_004852 15 9605>NP_004351 Length = 882 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 YFSLNTRFK 9 YFSL+TRFK Sbjct: 68 YFSLDTRFK 76>NP_078948 Length = 903 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 Y++L TR+K Sbjct: 638 YYNLETRYK 646>NP_037472 Length = 818 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 YFSLNTRF 8 YF L+TRF Sbjct: 177 YFHLHTRF 184>XP_005263278 Length = 620 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 Y++L TR+K Sbjct: 355 YYNLETRYK 363>XP_005263277 Length = 759 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 Y++L TR+K Sbjct: 494 YYNLETRYK 502>NP_001265473 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 ++ LNTRF+ Sbjct: 141 HYILNTRFR 149>NP_000057 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 ++ LNTRF+ Sbjct: 203 HYILNTRFR 211>NP_001265472 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 ++ LNTRF+ Sbjct: 151 HYILNTRFR 159>XP_005271223 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 ++ LNTRF+ Sbjct: 240 HYILNTRFR 248>XP_006710936 Length = 630 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFSLNTRFK 9 ++ LNTRF+ Sbjct: 242 HYILNTRFR 250>NP_079350 Length = 4012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLNT F+ Sbjct: 3660 YSLNTEFQ 3667>NP_006217 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YFSLNTR 7 YFS NT+ Sbjct: 706 YFSANTK 712>NP_872384 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLNTRFK 9 SLN RFK Sbjct: 185 SLNIRFK 191>NP_001092805 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFSLNTRF 8 +FS NT F Sbjct: 183 FFSCNTEF 190>NP_055574 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFSLNTRF 8 +FS NT F Sbjct: 183 FFSCNTEF 190>XP_006716479 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFSLNTRF 8 +FS NT F Sbjct: 183 FFSCNTEF 190>XP_006714380 Length = 3897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLNT F+ Sbjct: 3545 YSLNTEFQ 3552>XP_006714379 Length = 3936 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLNT F+ Sbjct: 3584 YSLNTEFQ 3591>XP_006714378 Length = 3965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLNT F+ Sbjct: 3613 YSLNTEFQ 3620>XP_006714377 Length = 4010 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLNT F+ Sbjct: 3658 YSLNTEFQ 3665>XP_005246701 Length = 1016 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YFSLNTR 7 YFS NT+ Sbjct: 627 YFSANTK 633>XP_005246700 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YFSLNTR 7 YFS NT+ Sbjct: 632 YFSANTK 638>XP_005245152 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLNTRFK 9 SLN RFK Sbjct: 185 SLNIRFK 191>NP_001175 Length = 2644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNTRFK 9 LNTR+K Sbjct: 1458 LNTRYK 1463>NP_005492 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FSLNTRF 8 F+L+TRF Sbjct: 33 FNLDTRF 39>NP_002195 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FSLNTRF 8 F+L+TRF Sbjct: 33 FNLDTRF 39>NP_001265723 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YFSLNTRFK 9 Y LNT FK Sbjct: 322 YGFLNTNFK 330>NP_061325 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 781 YFDLNT 786>NP_780778 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 162 YFKLNNR 168>NP_940998 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 781 YFDLNT 786>NP_001155313 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 781 YFDLNT 786>NP_005963 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YFSLNTRFK 9 Y LNT FK Sbjct: 322 YGFLNTNFK 330>NP_056127 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>NP_001135392 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 163 YFKLNNR 169>NP_001135391 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 177 YFKLNNR 183>NP_689835 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFSLNTRF 8 YF+ TRF Sbjct: 331 YFAQQTRF 338>NP_002421 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SLNTRFK 9 S+NT FK Sbjct: 29 SMNTHFK 35>NP_001265724 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YFSLNTRFK 9 Y LNT FK Sbjct: 322 YGFLNTNFK 330>XP_005274644 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 178 YFKLNNR 184>XP_005261913 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 275 YFKLNAR 281>XP_005261910 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 275 YFKLNAR 281>XP_005261905 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 275 YFKLNAR 281>XP_006723893 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 781 YFDLNT 786>XP_005260515 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 781 YFDLNT 786>XP_006723892 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 782 YFDLNT 787>XP_006723891 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 782 YFDLNT 787>XP_006723890 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFSLNT 6 YF LNT Sbjct: 782 YFDLNT 787>XP_005257365 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FSLNTRF 8 F+L+TRF Sbjct: 33 FNLDTRF 39>XP_005277701 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YFSLNTRFK 9 Y LNT FK Sbjct: 322 YGFLNTNFK 330>XP_006717608 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YFSLNTRFK 9 Y LNT FK Sbjct: 322 YGFLNTNFK 330>XP_005248505 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YFSLNTRF 8 YF+ TRF Sbjct: 332 YFAQQTRF 339>XP_006714407 Length = 5004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3154 YSLNLQFK 3161>XP_006714406 Length = 3680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>XP_006714405 Length = 4103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 2232 YSLNLQFK 2239>XP_005263349 Length = 4410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 2539 YSLNLQFK 2546>XP_005263348 Length = 4443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 2572 YSLNLQFK 2579>XP_005263347 Length = 4640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>XP_005263346 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3112 YSLNLQFK 3119>XP_005263345 Length = 4991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>XP_005263344 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>XP_005263343 Length = 5009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3138 YSLNLQFK 3145>XP_005263342 Length = 5025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3154 YSLNLQFK 3161>XP_005263341 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>XP_005263340 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>XP_005263339 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSLNTRFK 9 +SLN +FK Sbjct: 3155 YSLNLQFK 3162>NP_004852 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 YFSLNTR 7 YF LN R Sbjct: 275 YFKLNAR 281Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.143 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,586 Number of extensions: 681 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |