Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_001013758 17 3301 NP_689844 17 3301 NP_852091 16 5631 NP_001124396 16 5631 NP_001010866 16 5631 XP_006710481 16 5631 XP_006710480 16 5631 NP_997716 16 7355 NP_001130015 16 7355 NP_001275648 16 7355 NP_001275647 16 7355 NP_001275649 16 7355 NP_003143 16 7355 NP_055192 16 7355 NP_001123359 16 7355 NP_001130010 16 7355 XP_005257681 16 7355 NP_079523 16 7355 NP_000731 15 9605 NP_001107578 15 9605 NP_001245271 15 9605 NP_001245269 15 9605 NP_689582 15 9605 NP_001245270 15 9605 NP_001245272 15 9605 NP_001077362 15 9605 XP_005273091 15 9605 XP_005273090 15 9605 XP_006711795 15 9605 XP_005273089 15 9605 XP_005270500 15 9605 XP_005270499 15 9605 XP_005270498 15 9605 XP_005270497 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YFIKRANRR 9 YFIK ANRR Sbjct: 103 YFIKCANRR 111>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YFIKRANRR 9 YFIK ANRR Sbjct: 103 YFIKCANRR 111>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YFIKRANRR 9 YFIK ANRR Sbjct: 103 YFIKCANRR 111>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YFIKRANRR 9 YFIK ANRR Sbjct: 103 YFIKCANRR 111>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YFIKRANRR 9 YFIK ANRR Sbjct: 103 YFIKCANRR 111>NP_001013758 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YFIKRANRR 9 YF KR +RR Sbjct: 29 YFAKRKHRR 37>NP_689844 Length = 645 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 YFIKRANRR 9 YF KR +RR Sbjct: 29 YFAKRKHRR 37>NP_852091 Length = 941 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YFIKRANRR 9 YFIK+A+ + Sbjct: 513 YFIKKAHSK 521>NP_001124396 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFIKRANRR 9 Y+IK NR+ Sbjct: 173 YYIKHQNRQ 181>NP_001010866 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFIKRANRR 9 Y+IK NR+ Sbjct: 173 YYIKHQNRQ 181>XP_006710481 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFIKRANRR 9 Y+IK NR+ Sbjct: 173 YYIKHQNRQ 181>XP_006710480 Length = 642 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFIKRANRR 9 Y+IK NR+ Sbjct: 173 YYIKHQNRQ 181>NP_997716 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IKRANR 8 IKRANR Sbjct: 64 IKRANR 69>NP_001130015 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IKRANR 8 IKRANR Sbjct: 16 IKRANR 21>NP_001275648 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 IKRA+RR Sbjct: 394 IKRADRR 400>NP_001275647 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 IKRA+RR Sbjct: 424 IKRADRR 430>NP_001275649 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 IKRA+RR Sbjct: 424 IKRADRR 430>NP_003143 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 IKRA+RR Sbjct: 424 IKRADRR 430>NP_055192 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FIKRANR 8 F+KR NR Sbjct: 38 FVKRRNR 44>NP_001123359 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FIKRANR 8 F+KR NR Sbjct: 38 FVKRRNR 44>NP_001130010 Length = 1090 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFIKRANR 8 Y+I+ ANR Sbjct: 331 YYIRLANR 338>XP_005257681 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 IKRA+RR Sbjct: 424 IKRADRR 430>NP_079523 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFIKRANR 8 Y+I+ ANR Sbjct: 300 YYIRLANR 307>NP_000731 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 +KR+NRR Sbjct: 300 MKRSNRR 306>NP_001107578 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 621 FVKRSNK 627>NP_001245271 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 585 FVKRSNK 591>NP_001245269 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 620 FVKRSNK 626>NP_689582 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 573 FVKRSNK 579>NP_001245270 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 588 FVKRSNK 594>NP_001245272 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 553 FVKRSNK 559>NP_001077362 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IKRANR 8 +KRANR Sbjct: 365 VKRANR 370>XP_005273091 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_005273090 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_006711795 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_005273089 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKRANRR 9 +KR+NRR Sbjct: 300 MKRSNRR 306>XP_005270500 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 541 FVKRSNK 547>XP_005270499 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 542 FVKRSNK 548>XP_005270498 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 573 FVKRSNK 579>XP_005270497 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIKRANR 8 F+KR+N+ Sbjct: 589 FVKRSNK 595Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.149 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,259 Number of extensions: 551 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |