Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 20 509 NP_861969 20 509 NP_000259 20 509 NP_861968 20 509 NP_861966 20 509 NP_861970 20 509 NP_861546 20 509 NP_861967 20 509 NP_002435 17 2528 XP_005262326 17 2528 NP_000074 17 4312 NP_003370 17 4312 NP_001104547 17 4312 NP_000224 17 4312 NP_001247421 17 4312 NP_001247423 17 4312 NP_001247422 17 4312 NP_002897 17 4312 XP_006715624 17 4312 XP_005264366 17 4312 XP_006712078 17 4312 NP_001129074 16 5631 NP_001073279 16 5631 NP_000395 16 5631 NP_001004708 16 5631 NP_001615 16 5631 XP_005266896 16 5631 NP_071431 16 7355 NP_001136037 16 7355 NP_001129512 16 7355 NP_079087 16 7355 NP_071735 16 7355 NP_001230131 16 7355 NP_036548 16 7355 XP_005274356 16 7355 XP_005274355 16 7355 XP_006718754 16 7355 XP_006718753 16 7355 XP_005265443 16 7355 XP_005265442 16 7355 XP_005265441 16 7355 XP_005265440 16 7355 NP_003061 15 9605 NP_001276325 15 9605 NP_620614 15 9605 NP_001276326 15 9605 NP_002821 15 9605>NP_057502 Length = 590 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 221 YFAIRNKK 228>NP_861969 Length = 507 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 138 YFAIRNKK 145>NP_000259 Length = 595 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 221 YFAIRNKK 228>NP_861968 Length = 507 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 138 YFAIRNKK 145>NP_861966 Length = 548 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 179 YFAIRNKK 186>NP_861970 Length = 590 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 221 YFAIRNKK 228>NP_861546 Length = 590 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 221 YFAIRNKK 228>NP_861967 Length = 549 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YFAIRNK+ Sbjct: 180 YFAIRNKK 187>NP_002435 Length = 577 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YF+I+NK+ Sbjct: 205 YFSIKNKK 212>XP_005262326 Length = 578 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 YFAIRNKR 8 YF+I+NK+ Sbjct: 206 YFSIKNKK 213>NP_000074 Length = 988 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 296 YFAVRN 301>NP_003370 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 205 YFEIKNKK 212>NP_001104547 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 205 YFEIKNKK 212>NP_000224 Length = 699 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 550 YFAVRN 555>NP_001247421 Length = 604 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 205 YFEIKNKK 212>NP_001247423 Length = 447 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 69 YFEIKNKK 76>NP_001247422 Length = 604 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 205 YFEIKNKK 212>NP_002897 Length = 583 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 205 YFEIKNKK 212>XP_006715624 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YFAIRNKR 8 YF I+NK+ Sbjct: 205 YFEIKNKK 212>XP_005264366 Length = 380 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 231 YFAVRN 236>XP_006712078 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 240 YFAVRN 245>NP_001129074 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 216 YFALRN 221>NP_001073279 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 317 YFALRN 322>NP_000395 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YFA+RN Sbjct: 347 YFALRN 352>NP_001004708 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YFAIRNK 7 YF +RNK Sbjct: 60 YFLLRNK 66>NP_001615 Length = 1723 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YFAIRNK 7 YF +RNK Sbjct: 1589 YFRLRNK 1595>XP_005266896 Length = 2131 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YFAIRNK 7 YF +RNK Sbjct: 1997 YFRLRNK 2003>NP_071431 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 YFAIRN 6 YF+IRN Sbjct: 96 YFSIRN 101>NP_001136037 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 74 YSGLRNRRA 82>NP_001129512 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 74 YSGLRNRRA 82>NP_079087 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 117 YSGLRNRRA 125>NP_071735 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FAIRNKR 8 F+IRN+R Sbjct: 170 FSIRNRR 176>NP_001230131 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIRNKRA 9 A+RN+RA Sbjct: 56 AVRNRRA 62>NP_036548 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIRNKRA 9 A+RN+RA Sbjct: 56 AVRNRRA 62>XP_005274356 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 74 YSGLRNRRA 82>XP_005274355 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 117 YSGLRNRRA 125>XP_006718754 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 117 YSGLRNRRA 125>XP_006718753 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YFAIRNKRA 9 Y +RN+RA Sbjct: 117 YSGLRNRRA 125>XP_005265443 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FAIRNKR 8 F+IRN+R Sbjct: 81 FSIRNRR 87>XP_005265442 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FAIRNKR 8 F+IRN+R Sbjct: 170 FSIRNRR 176>XP_005265441 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FAIRNKR 8 F+IRN+R Sbjct: 170 FSIRNRR 176>XP_005265440 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FAIRNKR 8 F+IRN+R Sbjct: 170 FSIRNRR 176>NP_003061 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFAIRN 6 YFA RN Sbjct: 1085 YFAFRN 1090>NP_001276325 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFAIRN 6 YFA RN Sbjct: 1085 YFAFRN 1090>NP_620614 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFAIRN 6 YFA RN Sbjct: 1085 YFAFRN 1090>NP_001276326 Length = 1514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YFAIRN 6 YFA RN Sbjct: 1027 YFAFRN 1032>NP_002821 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IRNKRA 9 +RNKRA Sbjct: 837 VRNKRA 842Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.142 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,360 Number of extensions: 571 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |