Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 390 NP_653080 20 390 XP_005267292 20 390 XP_005267291 20 390 XP_005267290 20 390 NP_002652 18 1935 NP_061130 17 3301 NP_001231118 17 4312 NP_001231121 17 4312 NP_055564 17 4312 NP_001231119 17 4312 NP_001231120 17 4312 NP_001231122 17 4312 XP_006720406 17 4312 XP_006720405 17 4312 XP_006720404 17 4312 XP_006720403 17 4312 XP_006720402 17 4312 XP_006720400 17 4312 XP_006720399 17 4312 NP_056355 16 7355 NP_004609 16 7355 NP_006746 16 7355 NP_055299 16 7355 XP_005256833 16 7355 XP_006720533 16 7355 XP_006720532 16 7355 XP_005254354 16 7355 XP_005245161 16 7355 NP_037485 16 7355 NP_055978 15 9605 NP_443210 15 9605 NP_001940 15 9605 NP_001230005 15 9605 NP_073143 15 9605 NP_001937 15 9605 NP_689619 15 9605 NP_001139809 15 9605 XP_006720401 15 9605 XP_005267359 15 9605 XP_005267358 15 9605 XP_006720081 15 9605 XP_006720080 15 9605 XP_005248925 15 9605 XP_005248923 15 9605 XP_005248922 15 9605 XP_005268430 15 9605>NP_005091 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YDAVE EKM Sbjct: 852 YDAVEREKM 860>NP_653080 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YDAVE EKM Sbjct: 754 YDAVEREKM 762>XP_005267292 Length = 1677 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YDAVE EKM Sbjct: 747 YDAVEREKM 755>XP_005267291 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YDAVE EKM Sbjct: 754 YDAVEREKM 762>XP_005267290 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YDAVE EKM Sbjct: 852 YDAVEREKM 860>NP_002652 Length = 1265 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YDAV+M+ M Sbjct: 306 YDAVDMQDM 314>NP_061130 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DAVEMEKM 9 DAVEM++M Sbjct: 161 DAVEMDEM 168>NP_001231118 Length = 1644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1334 HDAVEME 1340>NP_001231121 Length = 1504 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1237 HDAVEME 1243>NP_055564 Length = 1472 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1205 HDAVEME 1211>NP_001231119 Length = 1533 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1266 HDAVEME 1272>NP_001231120 Length = 1463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1196 HDAVEME 1202>NP_001231122 Length = 1347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1141 HDAVEME 1147>XP_006720406 Length = 1591 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720405 Length = 1347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720404 Length = 1477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720403 Length = 1486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720402 Length = 1487 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720400 Length = 1526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>XP_006720399 Length = 1548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEME Sbjct: 1281 HDAVEME 1287>NP_056355 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAVEMEKM 9 D VE+EK+ Sbjct: 330 DTVELEKL 337>NP_004609 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAVEMEKM 9 D VE+EK+ Sbjct: 328 DTVELEKL 335>NP_006746 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DAVEMEKM 9 DAV++E+M Sbjct: 318 DAVKLERM 325>NP_055299 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YDAVEMEKM 9 YD VEM + Sbjct: 114 YDVVEMSNL 122>XP_005256833 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAVEMEKM 9 D VE+EK+ Sbjct: 233 DTVELEKL 240>XP_006720533 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAVEMEKM 9 D VE+EK+ Sbjct: 35 DTVELEKL 42>XP_006720532 Length = 1333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAVEMEKM 9 D VE+EK+ Sbjct: 270 DTVELEKL 277>XP_005254354 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAVEMEKM 9 D VE+EK+ Sbjct: 330 DTVELEKL 337>XP_005245161 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DAVEME 7 DAVEME Sbjct: 257 DAVEME 262>NP_037485 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DAVEME 7 DAVEME Sbjct: 296 DAVEME 301>NP_055978 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YD ++++KM Sbjct: 60 YDYLDLDKM 68>NP_443210 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YD ++++KM Sbjct: 60 YDYLDLDKM 68>NP_001940 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 +DA ++EK+ Sbjct: 448 FDAYDLEKL 456>NP_001230005 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 +DA ++EK+ Sbjct: 317 FDAYDLEKL 325>NP_073143 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YDAVEMEK 8 YD V+M+K Sbjct: 174 YDIVKMKK 181>NP_001937 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YDAVEMEK 8 YD V+M+K Sbjct: 320 YDIVKMKK 327>NP_689619 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YDAVEMEKM 9 YD V EKM Sbjct: 557 YDDVPYEKM 565>NP_001139809 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YDAVEMEKM 9 YD V EKM Sbjct: 557 YDDVPYEKM 565>XP_006720401 Length = 1504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YDAVEME 7 +DAVEM+ Sbjct: 1281 HDAVEMD 1287>XP_005267359 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YD ++++KM Sbjct: 60 YDYLDLDKM 68>XP_005267358 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YD ++++KM Sbjct: 60 YDYLDLDKM 68>XP_006720081 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YD ++++KM Sbjct: 60 YDYLDLDKM 68>XP_006720080 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 YD ++++KM Sbjct: 60 YDYLDLDKM 68>XP_005248925 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 +DA ++EK+ Sbjct: 207 FDAYDLEKL 215>XP_005248923 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 +DA ++EK+ Sbjct: 318 FDAYDLEKL 326>XP_005248922 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YDAVEMEKM 9 +DA ++EK+ Sbjct: 323 FDAYDLEKL 331>XP_005268430 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 YDAVEMEKM 9 YD V EKM Sbjct: 524 YDDVPYEKM 532Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.124 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,348 Number of extensions: 895 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |