Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006463 18 1135 NP_001272979 17 3301 NP_056516 17 3301 NP_001120869 17 3301 NP_001120870 17 3301 XP_005273909 17 3301 NP_878914 17 4312 NP_878918 17 4312 XP_005267516 17 4312 XP_005267513 17 4312 NP_061720 17 4312 NP_001271216 16 5631 NP_001271218 16 5631 NP_001271215 16 5631 NP_001271214 16 5631 NP_001271217 16 5631 NP_001137310 16 5631 NP_808218 16 5631 NP_001271439 16 5631 NP_001271438 16 5631 NP_001002837 16 5631 XP_006724293 16 5631 XP_006721567 16 5631 NP_000546 16 7355 NP_055826 16 7355 NP_001185879 16 7355 NP_003696 16 7355 NP_001265208 16 7355 NP_115727 16 7355 NP_112196 16 7355 NP_060091 16 7355 NP_064601 16 7355 XP_006725429 16 7355 XP_005262148 16 7355 XP_005268810 16 7355 XP_005268809 16 7355 XP_005250521 16 7355 XP_005246980 16 7355 XP_005245478 16 7355 XP_005245477 16 7355 XP_005245476 16 7355 XP_005245475 16 7355 NP_036416 16 7355 NP_001186068 15 9605 NP_067032 15 9605 NP_001186067 15 9605 NP_001020278 15 9605 NP_056655 15 9605 NP_001127880 15 9605 NP_000824 15 9605 NP_056656 15 9605 NP_001102 15 9605 NP_001127879 15 9605 NP_001180424 15 9605 NP_001161693 15 9605 XP_005255325 15 9605 XP_005255324 15 9605 XP_005246404 15 9605 XP_006711176 15 9605 XP_006711175 15 9605 XP_006711174 15 9605 XP_006711173 15 9605 XP_006711172 15 9605>NP_006463 Length = 391 Score = 18.5 bits (36), Expect = 1135 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 YAPKFKF 7 YAP+FKF Sbjct: 366 YAPEFKF 372>NP_001272979 Length = 244 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YAPKFKF 7 YAP+F+F Sbjct: 48 YAPEFQF 54>NP_056516 Length = 483 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PKFKFRA 9 PK++FRA Sbjct: 247 PKYRFRA 253>NP_001120869 Length = 457 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PKFKFRA 9 PK++FRA Sbjct: 247 PKYRFRA 253>NP_001120870 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PKFKFRA 9 PK++FRA Sbjct: 247 PKYRFRA 253>XP_005273909 Length = 138 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YAPKFKF 7 YAP+F+F Sbjct: 48 YAPEFQF 54>NP_878914 Length = 429 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 APKFKFRA 9 AP+ KFRA Sbjct: 341 APRAKFRA 348>NP_878918 Length = 6907 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 APKFKFRA 9 AP+ KFRA Sbjct: 6819 APRAKFRA 6826>XP_005267516 Length = 6884 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 APKFKFRA 9 AP+ KFRA Sbjct: 6796 APRAKFRA 6803>XP_005267513 Length = 6921 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 APKFKFRA 9 AP+ KFRA Sbjct: 6833 APRAKFRA 6840>NP_061720 Length = 4024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 YAP F+F Sbjct: 3073 YAPDFRF 3079>NP_001271216 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 219 FAPTFKF 225>NP_001271218 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 287 FAPTFKF 293>NP_001271215 Length = 939 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 587 FAPTFKF 593>NP_001271214 Length = 1006 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 654 FAPTFKF 660>NP_001271217 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 287 FAPTFKF 293>NP_001137310 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKFKFRA 9 PKF FR+ Sbjct: 375 PKFNFRS 381>NP_808218 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKFKFRA 9 PKF FR+ Sbjct: 375 PKFNFRS 381>NP_001271439 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKFKFRA 9 PKF FR+ Sbjct: 332 PKFNFRS 338>NP_001271438 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKFKFRA 9 PKF FR+ Sbjct: 358 PKFNFRS 364>NP_001002837 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 286 FAPTFKF 292>XP_006724293 Length = 702 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 +AP FKF Sbjct: 350 FAPTFKF 356>XP_006721567 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKFKFRA 9 PKF FR+ Sbjct: 338 PKFNFRS 344>NP_000546 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YAPKFKF 7 ++PKF+F Sbjct: 62 FSPKFQF 68>NP_055826 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 PKFKFR 8 P FKFR Sbjct: 961 PSFKFR 966>NP_001185879 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 PKFKFR 8 P FKFR Sbjct: 983 PSFKFR 988>NP_003696 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAPKFK 6 Y PKFK Sbjct: 656 YLPKFK 661>NP_001265208 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAPKFK 6 Y PKFK Sbjct: 46 YQPKFK 51>NP_115727 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAPKFK 6 Y PKFK Sbjct: 46 YQPKFK 51>NP_112196 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PKFKFRA 9 PK KFRA Sbjct: 125 PKEKFRA 131>NP_060091 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YAPKFKFR 8 Y PK FR Sbjct: 109 YGPKVNFR 116>NP_064601 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAPKFKFRA 9 Y +FKFR+ Sbjct: 441 YVHEFKFRS 449>XP_006725429 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAPKFK 6 Y PKFK Sbjct: 69 YQPKFK 74>XP_005262148 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 YAPKFKF 7 ++PKF+F Sbjct: 50 FSPKFQF 56>XP_005268810 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 PKFKFR 8 PKF FR Sbjct: 759 PKFSFR 764>XP_005268809 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 PKFKFR 8 PKF FR Sbjct: 777 PKFSFR 782>XP_005250521 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 YAPKFKFR 8 Y PK FR Sbjct: 36 YGPKVNFR 43>XP_005246980 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 YAPKFK 6 Y PKFK Sbjct: 639 YLPKFK 644>XP_005245478 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAPKFKFRA 9 Y +FKFR+ Sbjct: 151 YVHEFKFRS 159>XP_005245477 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAPKFKFRA 9 Y +FKFR+ Sbjct: 151 YVHEFKFRS 159>XP_005245476 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAPKFKFRA 9 Y +FKFR+ Sbjct: 237 YVHEFKFRS 245>XP_005245475 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YAPKFKFRA 9 Y +FKFR+ Sbjct: 310 YVHEFKFRS 318>NP_036416 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 PKFKFR 8 PKF FR Sbjct: 837 PKFSFR 842>NP_001186068 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 + PK+KF Sbjct: 435 FKPKYKF 441>NP_067032 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 + PK+KF Sbjct: 435 FKPKYKF 441>NP_001186067 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 + PK+KF Sbjct: 435 FKPKYKF 441>NP_001020278 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 236 HEPRFKFQ 243>NP_056655 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 531 HEPRFKFQ 538>NP_001127880 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 Y+P F+F Sbjct: 676 YSPPFRF 682>NP_000824 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 Y+P F+F Sbjct: 676 YSPPFRF 682>NP_056656 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 531 HEPRFKFQ 538>NP_001102 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 531 HEPRFKFQ 538>NP_001127879 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 Y+P F+F Sbjct: 676 YSPPFRF 682>NP_001180424 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 236 HEPRFKFQ 243>NP_001161693 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + PKF+F+ Sbjct: 522 FKPKFQFQ 529>XP_005255325 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 Y+P F+F Sbjct: 728 YSPPFRF 734>XP_005255324 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 YAPKFKF 7 Y+P F+F Sbjct: 728 YSPPFRF 734>XP_005246404 Length = 1821 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + PKF+F+ Sbjct: 523 FKPKFQFQ 530>XP_006711176 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 236 HEPRFKFQ 243>XP_006711175 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 236 HEPRFKFQ 243>XP_006711174 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 236 HEPRFKFQ 243>XP_006711173 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 541 HEPRFKFQ 548>XP_006711172 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 YAPKFKFR 8 + P+FKF+ Sbjct: 541 HEPRFKFQ 548Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.145 0.476 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 598,421 Number of extensions: 1449 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |